clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF007C17 | Sequence | 520 | 007375 (21) | gb|KHG04573.1| | 7e-72 | Cinnamyl alcohol dehydrogenase 1 [Gossypium arboreum] | 797 | 007375 (21) | emb|CDO97223.1| | 3e-125 | unnamed protein product [Coffea canephora] |
JMFF014C15 | Sequence | 499 | 007375 (21) | ref|XP_011088206.1| | 7e-69 | PREDICTED: cinnamyl alcohol dehydrogenase 1 [Sesamum indicum] | 485 | 007375 (21) | gb|AFP43764.1| | 3e-55 | cinnamyl alcohol dehydrogenase [Nicotiana attenuata] |
JMFF015G23 | Sequence | 493 | 007375 (21) | gb|KHG04573.1| | 1e-61 | Cinnamyl alcohol dehydrogenase 1 [Gossypium arboreum] | 710 | 007375 (21) | emb|CDO97223.1| | 1e-107 | unnamed protein product [Coffea canephora] |
JMFF015H23 | Sequence | 278 | 007375 (21) | ref|XP_010247546.1| | 6e-33 | PREDICTED: cinnamyl alcohol dehydrogenase 1 [Nelumbo nucifera] | |||||
JMFF023B24 | Sequence | 506 | 007375 (21) | gb|KJB47360.1| | 2e-45 | hypothetical protein B456_008G022800 [Gossypium raimondii] | 726 | 007375 (21) | emb|CDO97223.1| | 9e-107 | unnamed protein product [Coffea canephora] |
JMFF037F22 | Sequence | 572 | 007375 (21) | gb|ACF17645.1| | 6e-61 | putative cinnamyl alcohol dehydrogenase [Capsicum annuum] | 759 | 007375 (21) | emb|CDO97223.1| | 2e-115 | unnamed protein product [Coffea canephora] |
JMFF051P19 | Sequence | 613 | 007375 (21) | gb|EYU37626.1| | 7e-97 | hypothetical protein MIMGU_mgv1a008869mg [Erythranthe guttata] | 573 | 007375 (21) | gb|AFP43764.1| | 2e-87 | cinnamyl alcohol dehydrogenase [Nicotiana attenuata] |
JMSF033P05 | Sequence | 652 | 007375 (21) | gb|KHG28325.1| | 2e-104 | putative cinnamyl alcohol dehydrogenase 1 [Gossypium arboreum] | 742 | 007375 (21) | ref|XP_009335831.1| | 2e-104 | PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Pyrus x bretschneideri] |
JMSF038D04 | Sequence | 661 | 007375 (21) | gb|KHG28325.1| | 2e-106 | putative cinnamyl alcohol dehydrogenase 1 [Gossypium arboreum] | 921 | 007375 (21) | emb|CDO97223.1| | 1e-161 | unnamed protein product [Coffea canephora] |
JMSF039A10 | Sequence | 636 | 007375 (21) | gb|KHG28325.1| | 3e-103 | putative cinnamyl alcohol dehydrogenase 1 [Gossypium arboreum] | 795 | 007375 (21) | emb|CDO97223.1| | 4e-111 | unnamed protein product [Coffea canephora] |
JMSF051B12 | Sequence | 621 | 007375 (21) | gb|EYU37626.1| | 3e-98 | hypothetical protein MIMGU_mgv1a008869mg [Erythranthe guttata] | 809 | 007375 (21) | emb|CDO97223.1| | 3e-148 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig007375============================================1497 57 --------------------------------->JMFF023B24 <-----------------------------------------------rJMFF023B24 57 ------------------------------------->JMFF037F22 <--------------------------------------------------rJMFF037F22 117 ----------------------------------------->JMSF039A10 <----------------------------------------------------rJMSF039A10 164 -------------------------------->JMFF014C15 <-------------------------------rJMFF014C15 172 ---------------------------------->JMFF007C17 <----------------------------------------------------rJMFF007C17 179 ------------------------------------------>JMSF033P05 <-----------------------------------------------rJMSF033P05 183 -------------------------------->JMFF015G23 <----------------------------------------------rJMFF015G23 203 ------------------------------------------->JMSF038D04 <------------------------------------------------------------rJMSF038D04 208 ---------------------------------------->JMFF051P19 <-------------------------------------rJMFF051P19 253 ---------------------------------------->JMSF051B12 <-----------------------------------------------------rJMSF051B12
The following clones don't have the opposite end in this pair.
----------------->JMFF015H23-