clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF010P17 | Sequence | 543 | 012986 (7) | ref|XP_006347037.1| | 1e-52 | PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Solanum tuberosum] | 812 | 012986 (7) | ref|XP_009595225.1| | 5e-74 | PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Nicotiana tomentosifo |
JMFF047L09 | Sequence | 644 | 012986 (7) | ref|XP_006347037.1| | 4e-70 | PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Solanum tuberosum] | 587 | 012986 (7) | ref|XP_009773318.1| | 7e-43 | PREDICTED: 50S ribosomal protein L21, mitochondrial-like isoform X1 [Nicotiana |
JMSF049L02 | Sequence | 701 | 012986 (7) | ref|XP_006347037.1| | 1e-76 | PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Solanum tuberosum] | 794 | 012986 (7) | ref|XP_009595225.1| | 4e-74 | PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Nicotiana tomentosifo |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012986============================================1073 13 ----------------------------------------------------------->JMFF047L09 <------------------------------------------------------rJMFF047L09 31 ------------------------------------------------->JMFF010P17 <---------------------------------------------------------------------------rJMFF010P17 80 ---------------------------------------------------------------->JMSF049L02 <-------------------------------------------------------------------------rJMSF049L02
The following clones don't have the opposite end in this pair.
---------------------->JMSF005D10*