List of clones in pair P017730.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008E12Sequence586011238 (21)ref|XP_004251036.1|2e-20PREDICTED: 60S acidic ribosomal protein P2-2 [Solanum lycopersicum]581011238 (21)ref|XP_004251036.1|2e-20PREDICTED: 60S acidic ribosomal protein P2-2 [Solanum lycopersicum]
JMFF010L08Sequence426011238 (21)ref|XP_009800754.1|6e-15PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]
JMFF036D16Sequence498011238 (21)ref|XP_009800754.1|2e-21PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]467011238 (21)ref|XP_009800754.1|1e-21PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]
JMFF044N16Sequence573011238 (21)ref|XP_009800754.1|2e-20PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]
JMFF046M22Sequence491011238 (21)ref|XP_009800754.1|1e-21PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]488011238 (21)ref|XP_009800754.1|1e-21PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]
JMFS066D05Sequence590011238 (21)ref|XP_009800754.1|3e-21PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]
JMFS076H10Sequence539011238 (21)ref|XP_009800754.1|2e-21PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]
JMFS080G01Sequence537011238 (21)ref|XP_009800754.1|2e-21PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]
JMSF002N05Sequence371011238 (21)ref|XP_009800754.1|1e-20PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]569011238 (21)ref|XP_009800754.1|2e-21PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]
JMSF003M12Sequence298011238 (21)ref|XP_009800754.1|6e-21PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]565011238 (21)ref|XP_009800754.1|2e-21PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]
JMSF011A16Sequence250011238 (21)ref|XP_009800754.1|4e-19PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]509011238 (21)ref|XP_009800754.1|1e-21PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]
JMSF016D02Sequence406011238 (21)ref|XP_009800754.1|4e-20PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]623011238 (21)ref|XP_009800754.1|3e-21PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]
JMSF027I24Sequence611011238 (21)ref|XP_009800754.1|3e-21PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]566011238 (21)ref|XP_009800754.1|2e-21PREDICTED: 60S acidic ribosomal protein P2-1-like [Nicotiana sylvestris]

Contig 11238 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig011238============================================ 626         
   4  ---------------------------------------------------------------->JMSF016D02                                     
      <---------------------------------------------------------------------------------------------------rJMSF016D02  
  47   -------------------------------------------------------------------------------------------->JMFF008E12        
       <-------------------------------------------------------------------------------------------rJMFF008E12  
  60  ---------------------------------------------------------->JMSF002N05                                           
     <------------------------------------------------------------------------------------------rJMSF002N05  
  60  ----------------------------------------------------------------->JMSF027I24                                    
      <-----------------------------------------------------------------------------------------rJMSF027I24  
  61  ----------------------------------------------->JMSF003M12                                                      
      <-----------------------------------------------------------------------------------------rJMSF003M12  
 118  --------------------------------------->JMSF011A16                                                              
      <--------------------------------------------------------------------------------rJMSF011A16  
 138  ----------------------------------------------------------------------------->JMFF046M22                        
      <-----------------------------------------------------------------------------rJMFF046M22  
 159  ----------------------------------------------------------------------------->JMFF036D16                        
      <--------------------------------------------------------------------------rJMFF036D16

The following clones don't have the opposite end in this pair.

        --------------------------------------------------------------------------------------------->JMFS066D05-     
         ------------------------------------------------------------------------------------->JMFS076H10-            
      ------------------------------------------------------------------------------------------->JMFF044N16-         
      <-------------------------------------------------------------------rJMFF010L08-                                
        ------------------------------------------------------------------------------------->JMFS080G01-