List of clones in pair P017721.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009N15Sequence541005933 (39)ref|XP_007150302.1|1e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot630005933 (39)ref|XP_007150302.1|3e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot
JMFF015P11Sequence449005933 (39)ref|XP_002533104.1|8e-42histone h2a, putative [Ricinus communis] gb|EEF29276.1| histone h2a, putative [R576005933 (39)ref|XP_009628436.1|6e-49PREDICTED: probable histone H2A.1 [Nicotiana tomentosiformis]
JMFF016K20Sequence250005933 (39)ref|XP_002533104.1|5e-10histone h2a, putative [Ricinus communis] gb|EEF29276.1| histone h2a, putative [R
JMFF036J18Sequence509005933 (39)ref|XP_007150302.1|8e-50hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot630005933 (39)ref|XP_007150302.1|3e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot
JMFF039H14Sequence469005933 (39)ref|XP_002533104.1|9e-48histone h2a, putative [Ricinus communis] gb|EEF29276.1| histone h2a, putative [R671005933 (39)ref|XP_007150302.1|5e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot
JMFF039M22Sequence528005933 (39)ref|XP_009628436.1|3e-47PREDICTED: probable histone H2A.1 [Nicotiana tomentosiformis]
JMFF043A02Sequence646005933 (39)ref|XP_009628436.1|3e-48PREDICTED: probable histone H2A.1 [Nicotiana tomentosiformis]512005933 (39)ref|XP_009766769.1|3e-44PREDICTED: histone H2A [Nicotiana sylvestris]
JMFF043B12Sequence605005933 (39)ref|XP_007150302.1|3e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot632005933 (39)ref|XP_009628436.1|3e-49PREDICTED: probable histone H2A.1 [Nicotiana tomentosiformis]
JMFN003J06Sequence625005933 (39)ref|XP_007150302.1|3e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot
JMFN004B13Sequence595005933 (39)ref|XP_002533104.1|7e-49histone h2a, putative [Ricinus communis] gb|EEF29276.1| histone h2a, putative [R
JMFN008F09Sequence519005933 (39)ref|WP_039311042.1|2e-35hypothetical protein [Paenibacillus sp. IHB B 3415] gb|AEC10950.1| histone H2A [
JMFN009F04Sequence621005933 (39)ref|XP_007150302.1|3e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot
JMFN009M15Sequence617005933 (39)ref|XP_007150302.1|3e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot
JMFN011P01Sequence622005933 (39)ref|XP_007150302.1|3e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot
JMFN012J02Sequence439005933 (39)ref|WP_039311042.1|2e-27hypothetical protein [Paenibacillus sp. IHB B 3415] gb|AEC10950.1| histone H2A [
JMFN016I17Sequence611005933 (39)ref|XP_007150302.1|3e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot
JMFN020B09Sequence635005933 (39)ref|XP_007150302.1|4e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot
JMFN028G13Sequence591005933 (39)ref|XP_007150302.1|2e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot
JMFN029J14Sequence304005933 (39)ref|XP_007150302.1|9e-23hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot
JMSF002K02Sequence446005933 (39)ref|XP_002533104.1|6e-32histone h2a, putative [Ricinus communis] gb|EEF29276.1| histone h2a, putative [R636005933 (39)ref|XP_007150302.1|4e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot
JMSF023D05Sequence654005933 (39)ref|XP_007150302.1|4e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot656005933 (39)ref|XP_007150302.1|4e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot
JMSF027C09Sequence663005933 (39)ref|XP_009628436.1|3e-48PREDICTED: probable histone H2A.1 [Nicotiana tomentosiformis]664005933 (39)ref|XP_009628436.1|3e-48PREDICTED: probable histone H2A.1 [Nicotiana tomentosiformis]
JMSF037E08Sequence662005933 (39)ref|XP_007150302.1|5e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot611005933 (39)ref|XP_007150302.1|3e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot
JMSF039F13Sequence671005933 (39)ref|XP_007150302.1|5e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot665005933 (39)ref|XP_007150302.1|5e-49hypothetical protein PHAVU_005G142000g [Phaseolus vulgaris] gb|ESW22296.1| hypot

Contig 5933 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005933============================================ 744         
  50  -------------------------------------------------------------------------------------->JMFF043A02               
                              <--------------------------------------------------------------------rJMFF043A02  
  53   --------------------------------------------------------------------------------->JMFF043B12                   
                    <-------------------------------------------------------------------------------rJMFF043B12  
  64  ----------------------------------------------------------->JMFF015P11                                          
                    <-----------------------------------------------------------------------------rJMFF015P11  
  67  -------------------------------------------------------------->JMFF039H14                                       
       <-----------------------------------------------------------------------------------------rJMFF039H14  
  83  ----------------------------------------------------------------------------------------->JMSF039F13            
      <----------------------------------------------------------------------------------------rJMSF039F13  
  88  --------------------------------------------------------------------------------------->JMSF023D05              
      <---------------------------------------------------------------------------------------rJMSF023D05  
  88  ---------------------------------------------------------------------------------------->JMSF027C09             
      <---------------------------------------------------------------------------------------rJMSF027C09  
 107  ----------------------------------------------------------->JMSF002K02                                          
      <-------------------------------------------------------------------------------------rJMSF002K02  
 112        -------------------------------------------------------------------->JMFF036J18                           
            <------------------------------------------------------------------------------------rJMFF036J18  
 112        ------------------------------------------------------------------------>JMFF009N15                       
            <------------------------------------------------------------------------------------rJMFF009N15  
 133  --------------------------------------------------------------------------------------->JMSF037E08              
      <---------------------------------------------------------------------------------rJMSF037E08

The following clones don't have the opposite end in this pair.

                                         ---------------------------------------------------------->JMFN012J02-       
         ----------------------------------------------------------------------------------->JMFN009F04-              
        ----------------------------------------------------------------------------------->JMFN003J06-               
      --------------------------------->JMFF016K20-                                                                   
      ---------------------------------------->JMFF020D17#                                                            
                    ------------------------------------------------------------------------------->JMFN004B13-       
               ---------------------------------------->JMFN029J14-                                                   
       <-------------------------------------------------------------------------------rJMSF018F16*                   
          ------------------------------------------------------------------------------------->JMFN020B09-           
          --------------------------------------------------------------------------------->JMFN016I17-               
           ------------------------------------------------------------------------------->JMFN028G13-                
                                                    <---------------------------------------rJMSF004M23*              
        ---------------------------------------------------------------------------------->JMFN009M15-                
                          <----------------------------------------------------------------------rJMFF039M22-         
     --------------------------------------------------------------->JMFF014N06#                                      
                                   <---------------------------------------------------------------------JMFN008F09-  
         ----------------------------------------------------------------------------------->JMFN011P01-