| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF001G21 | Sequence | 151 | 001602 (20) | emb|CDY70033.1| | 3e-10 | BnaCnng66420D [Brassica napus] | |||||
| JMFF005G05 | Sequence | 472 | 001602 (20) | gb|KDP29212.1| | 4e-62 | hypothetical protein JCGZ_16601 [Jatropha curcas] | 759 | 001602 (20) | gb|KDP29212.1| | 3e-67 | hypothetical protein JCGZ_16601 [Jatropha curcas] |
| JMFF011F07 | Sequence | 327 | 001602 (20) | ref|XP_004304330.1| | 5e-36 | PREDICTED: caffeic acid 3-O-methyltransferase [Fragaria vesca subsp. vesca] | 658 | 001602 (20) | gb|KDP29212.1| | 9e-67 | hypothetical protein JCGZ_16601 [Jatropha curcas] |
| JMFF011J20 | Sequence | 494 | 001602 (20) | gb|KDP29212.1| | 2e-63 | hypothetical protein JCGZ_16601 [Jatropha curcas] | 734 | 001602 (20) | emb|CDY70033.1| | 7e-61 | BnaCnng66420D [Brassica napus] |
| JMFF013E04 | Sequence | 721 | 001602 (20) | gb|KDP29212.1| | 6e-83 | hypothetical protein JCGZ_16601 [Jatropha curcas] | |||||
| JMFF029J06 | Sequence | 514 | 001602 (20) | ref|XP_004304330.1| | 1e-75 | PREDICTED: caffeic acid 3-O-methyltransferase [Fragaria vesca subsp. vesca] | 730 | 001602 (20) | ref|XP_006381361.1| | 6e-79 | hypothetical protein POPTR_0006s12160g [Populus trichocarpa] gb|ERP59158.1| hypo |
| JMFF049O03 | Sequence | 446 | 001602 (20) | gb|KDP29212.1| | 8e-61 | hypothetical protein JCGZ_16601 [Jatropha curcas] | 461 | 001602 (20) | ref|XP_003602595.1| | 1e-17 | Caffeic acid 3-O-methyltransferase [Medicago truncatula] gb|ACJ84599.1| unknown |
| JMFF049O17 | Sequence | 488 | 001602 (20) | ref|XP_004304330.1| | 3e-69 | PREDICTED: caffeic acid 3-O-methyltransferase [Fragaria vesca subsp. vesca] | 520 | 001602 (20) | emb|CDY70033.1| | 4e-38 | BnaCnng66420D [Brassica napus] |
| JMFF050F15 | Sequence | 566 | 001602 (20) | ref|XP_004304330.1| | 1e-90 | PREDICTED: caffeic acid 3-O-methyltransferase [Fragaria vesca subsp. vesca] | 549 | 001602 (20) | emb|CDY70033.1| | 3e-37 | BnaCnng66420D [Brassica napus] |
| JMFN009I20 | Sequence | 472 | 001602 (20) | ref|XP_003602595.1| | 6e-25 | Caffeic acid 3-O-methyltransferase [Medicago truncatula] gb|ACJ84599.1| unknown | |||||
| JMFN033B19 | Sequence | 618 | 001602 (20) | ref|XP_004304330.1| | 6e-100 | PREDICTED: caffeic acid 3-O-methyltransferase [Fragaria vesca subsp. vesca] | |||||
| JMFN036A24 | Sequence | 607 | 001602 (20) | gb|KDP29212.1| | 2e-90 | hypothetical protein JCGZ_16601 [Jatropha curcas] | |||||
| JMFS091D06 | Sequence | 620 | 001602 (20) | ref|XP_004304330.1| | 3e-100 | PREDICTED: caffeic acid 3-O-methyltransferase [Fragaria vesca subsp. vesca] | |||||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig001602============================================1390 4 ------------------------------->JMFF049O03 <--------------------------------rJMFF049O03 44 ---------------------------------------->JMFF050F15 <--------------------------------------rJMFF050F15 58 ---------------------------------->JMFF049O17 <------------------------------------rJMFF049O17 72 ----------------------->JMFF011F07 <----------------------------------------------rJMFF011F07 80 ------------------------------------>JMFF029J06 <---------------------------------------------------rJMFF029J06 91 -------------------------------->JMFF005G05 <------------------------------------------------------rJMFF005G05 149 --------------------------->JMFF011J20 <---------------------------------------------------rJMFF011J20
The following clones don't have the opposite end in this pair.
------------------------------------------->JMFN033B19- <--------rJMFF001G21- -------------------------------------------->JMFS091D06- <---------------------------------------------------rJMFF013E04- ------------------------------------------->JMFN036A24- -------------------------------->JMFN009I20-