List of clones in pair P017668.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020M14Sequence511007642 (12)ref|XP_010261622.1|6e-115PREDICTED: phosphoribulokinase, chloroplastic [Nelumbo nucifera]740007642 (12)ref|XP_009783382.1|2e-96PREDICTED: phosphoribulokinase, chloroplastic-like [Nicotiana sylvestris]
JMFF023D09Sequence446007642 (12)ref|XP_002510565.1|2e-47rac gtpase, putative [Ricinus communis] gb|EEF52752.1| rac gtpase, putative [Ric704007642 (12)ref|XP_009783382.1|3e-127PREDICTED: phosphoribulokinase, chloroplastic-like [Nicotiana sylvestris]
JMFN002E02Sequence492007642 (12)gb|AFW63506.1|8e-33phosphoribulokinase [Zea mays]
JMFN018C07Sequence590007642 (12)gb|KCW55525.1|2e-109hypothetical protein EUGRSUZ_I01414 [Eucalyptus grandis]
JMFS092C06Sequence594007642 (12)gb|KCW55525.1|2e-109hypothetical protein EUGRSUZ_I01414 [Eucalyptus grandis]
JMFS161E01Sequence561007642 (12)ref|XP_010518928.1|4e-128PREDICTED: phosphoribulokinase, chloroplastic [Tarenaya hassleriana]
JMSF011L09Sequence478007642 (12)ref|XP_004245935.1|1e-40PREDICTED: phosphoribulokinase, chloroplastic [Solanum lycopersicum]744007642 (12)ref|XP_009609042.1|6e-142PREDICTED: phosphoribulokinase, chloroplastic-like [Nicotiana tomentosiformis]
JMSF048J20Sequence680007642 (12)ref|XP_010261622.1|3e-102PREDICTED: phosphoribulokinase, chloroplastic [Nelumbo nucifera]721007642 (12)ref|XP_009783382.1|5e-142PREDICTED: phosphoribulokinase, chloroplastic-like [Nicotiana sylvestris]

Contig 7642 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig007642============================================2123         
 427                -------------------->JMFF023D09                                                                   
                                                                   <--------------------------------rJMFF023D09  
 659                           ---------------------->JMSF011L09                                                      
                                                                 <----------------------------------rJMSF011L09  
 743                             ------------------------------->JMSF048J20                                           
                                                                <---------------------------------rJMSF048J20  
 943                                         ----------------------->JMFF020M14                                       
                                                                  <---------------------------------rJMFF020M14

The following clones don't have the opposite end in this pair.

                                                                                  ---------------------->JMFN002E02-  
     ------------------------->JMFS092C06-                                                                            
                                                 ------------------------->JMFS161E01-                                
     ------------------------>JMFN018C07-