List of clones in pair P017659.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005M07Sequence481003955 (67)ref|XP_011090165.1|2e-66PREDICTED: serine--glyoxylate aminotransferase [Sesamum indicum]663003955 (67)ref|XP_010938608.1|1e-105PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMFF008H08Sequence594003955 (67)emb|CDP08481.1|4e-94unnamed protein product [Coffea canephora]710003955 (67)ref|XP_010938608.1|2e-116PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMFF022G16Sequence542003955 (67)emb|CDP08481.1|8e-82unnamed protein product [Coffea canephora]756003955 (67)ref|XP_010938608.1|1e-141PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMFF035N14Sequence580003955 (67)emb|CDP08481.1|2e-92unnamed protein product [Coffea canephora]698003955 (67)ref|XP_010938608.1|6e-118PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMFF039A20Sequence592003955 (67)emb|CDP08481.1|2e-96unnamed protein product [Coffea canephora]645003955 (67)ref|XP_010938608.1|6e-110PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMFF040H20Sequence522003955 (67)ref|XP_011090165.1|6e-79PREDICTED: serine--glyoxylate aminotransferase [Sesamum indicum]758003955 (67)ref|XP_010938608.1|1e-137PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMFF049D17Sequence634003955 (67)ref|XP_011090165.1|1e-79PREDICTED: serine--glyoxylate aminotransferase [Sesamum indicum]
JMFN029N12Sequence403003955 (67)gb|EYU35937.1|3e-52hypothetical protein MIMGU_mgv1a026291mg, partial [Erythranthe guttata]
JMSF003D10Sequence302003955 (67)gb|ACJ84853.1|1e-24unknown [Medicago truncatula]743003955 (67)ref|XP_010938608.1|2e-136PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF004E14Sequence416003955 (67)ref|XP_003600160.1|3e-51Alanine glyoxylate aminotransferase [Medicago truncatula] gb|AES70411.1| serine-479003955 (67)gb|KJB54391.1|1e-84hypothetical protein B456_009G074800 [Gossypium raimondii]
JMSF005E11Sequence337003955 (67)gb|ACJ84853.1|6e-37unknown [Medicago truncatula]
JMSF006J05Sequence349003955 (67)gb|ACJ84853.1|3e-36unknown [Medicago truncatula]554003955 (67)gb|EYU35937.1|7e-93hypothetical protein MIMGU_mgv1a026291mg, partial [Erythranthe guttata]
JMSF007H17Sequence370003955 (67)gb|ACJ84853.1|3e-41unknown [Medicago truncatula]785003955 (67)ref|XP_010938608.1|2e-150PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF008I04Sequence623003955 (67)ref|XP_010938608.1|2e-106PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF009L22Sequence268003955 (67)ref|XP_003600160.1|3e-17Alanine glyoxylate aminotransferase [Medicago truncatula] gb|AES70411.1| serine-777003955 (67)ref|XP_010938608.1|2e-150PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF012D18Sequence495003955 (67)gb|EPS59280.1|6e-70serine-glyoxylate aminotransferase [Genlisea aurea]745003955 (67)ref|XP_010938608.1|2e-136PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF014J11Sequence493003955 (67)gb|EPS59280.1|3e-69serine-glyoxylate aminotransferase [Genlisea aurea]748003955 (67)ref|XP_010938608.1|2e-143PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF015K16Sequence507003955 (67)gb|EPS59280.1|2e-73serine-glyoxylate aminotransferase [Genlisea aurea]733003955 (67)ref|XP_010938608.1|9e-142PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF019B17Sequence259003955 (67)ref|XP_003600160.1|5e-15Alanine glyoxylate aminotransferase [Medicago truncatula] gb|AES70411.1| serine-748003955 (67)ref|XP_010938608.1|5e-141PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF021L10Sequence675003955 (67)ref|XP_011090165.1|3e-114PREDICTED: serine--glyoxylate aminotransferase [Sesamum indicum]750003955 (67)ref|XP_010938608.1|2e-142PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF022P21Sequence175003955 (67)127003955 (67)
JMSF023L14Sequence671003955 (67)ref|XP_011090165.1|1e-113PREDICTED: serine--glyoxylate aminotransferase [Sesamum indicum]746003955 (67)ref|XP_010938608.1|7e-140PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF026G06Sequence672003955 (67)ref|XP_011090165.1|6e-113PREDICTED: serine--glyoxylate aminotransferase [Sesamum indicum]732003955 (67)ref|XP_010938608.1|6e-140PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF028D24Sequence672003955 (67)ref|XP_011090165.1|5e-113PREDICTED: serine--glyoxylate aminotransferase [Sesamum indicum]620003955 (67)ref|XP_010938608.1|4e-109PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF029L01Sequence674003955 (67)ref|XP_011090165.1|1e-113PREDICTED: serine--glyoxylate aminotransferase [Sesamum indicum]691003955 (67)ref|XP_010938608.1|1e-126PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF030M05Sequence671003955 (67)ref|XP_011090165.1|1e-113PREDICTED: serine--glyoxylate aminotransferase [Sesamum indicum]690003955 (67)ref|XP_010938608.1|1e-126PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF034N04Sequence672003955 (67)ref|XP_011090165.1|1e-113PREDICTED: serine--glyoxylate aminotransferase [Sesamum indicum]663003955 (67)ref|XP_010938608.1|4e-119PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF036G16Sequence675003955 (67)ref|XP_011090165.1|3e-114PREDICTED: serine--glyoxylate aminotransferase [Sesamum indicum]746003955 (67)ref|XP_010938608.1|1e-139PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF044H15Sequence320003955 (67)ref|XP_006659561.1|7e-50PREDICTED: serine--glyoxylate aminotransferase-like isoform X1 [Oryza brachyant
JMSF046M15Sequence722003955 (67)ref|XP_011090165.1|6e-127PREDICTED: serine--glyoxylate aminotransferase [Sesamum indicum]790003955 (67)ref|XP_006659561.1|4e-129PREDICTED: serine--glyoxylate aminotransferase-like isoform X1 [Oryza brachyant
JMSF048I06Sequence681003955 (67)ref|XP_011090165.1|3e-115PREDICTED: serine--glyoxylate aminotransferase [Sesamum indicum]740003955 (67)ref|XP_010938608.1|2e-140PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF050P16Sequence629003955 (67)emb|CDP08481.1|1e-103unnamed protein product [Coffea canephora]754003955 (67)ref|XP_010938608.1|1e-141PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]
JMSF051D01Sequence670003955 (67)ref|XP_011090165.1|3e-113PREDICTED: serine--glyoxylate aminotransferase [Sesamum indicum]740003955 (67)ref|XP_010938608.1|2e-140PREDICTED: serine--glyoxylate aminotransferase-like [Elaeis guineensis]

Contig 3955 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003955============================================1494         
   1 --------------------------------------->JMFF008H08                                                               
                                                         <-----------------------------------------------rJMFF008H08  
  11 ------------------------------->JMFF005M07                                                                       
                                                            <-------------------------------------------rJMFF005M07  
  30 -------------------------------------->JMFF035N14                                                                
                                                        <----------------------------------------------rJMFF035N14  
  49 ----------------------------------------------->JMSF046M15                                                       
                                                 <----------------------------------------------------rJMSF046M15  
  56 ----------------------------------------->JMSF050P16                                                             
                                                  <--------------------------------------------------rJMSF050P16  
  59  ----------------------------------->JMFF022G16                                                                  
                                                  <--------------------------------------------------rJMFF022G16  
  60 -------------------------------------------->JMSF023L14                                                          
                                                   <-------------------------------------------------rJMSF023L14  
  62 -------------------------------------------->JMSF021L10                                                          
                                                   <-------------------------------------------------rJMSF021L10  
  62 -------------------------------------------->JMSF048I06                                                          
                                                   <-------------------------------------------------rJMSF048I06  
  63 ---------------->JMSF019B17                                                                                      
                                                   <-------------------------------------------------rJMSF019B17  
  63 ------------------->JMSF003D10                                                                                   
                                                    <------------------------------------------------rJMSF003D10  
  63 ---------------------->JMSF006J05                                                                                
                                                                <------------------------------------rJMSF006J05  
  63 --------------------------->JMSF004E14                                                                           
                                                                     <-------------------------------rJMSF004E14  
  63 -------------------------------------------->JMSF029L01                                                          
                                                       <---------------------------------------------rJMSF029L01  
  63 -------------------------------------------->JMSF030M05                                                          
                                                       <---------------------------------------------rJMSF030M05  
  63 -------------------------------------------->JMSF036G16                                                          
                                                    <------------------------------------------------rJMSF036G16  
  66 -------------------------------------------->JMSF028D24                                                          
                                                            <----------------------------------------rJMSF028D24  
  66 -------------------------------------------->JMSF034N04                                                          
                                                         <-------------------------------------------rJMSF034N04  
  70 ------------------------>JMSF007H17                                                                              
                                                <---------------------------------------------------rJMSF007H17  
  71 ----------------->JMSF009L22                                                                                     
                                                <---------------------------------------------------rJMSF009L22  
  71 -------------------------------->JMSF014J11                                                                      
                                                  <-------------------------------------------------rJMSF014J11  
  71 -------------------------------------------->JMSF026G06                                                          
                                                   <------------------------------------------------rJMSF026G06  
  72 -------------------------------------------->JMSF051D01                                                          
                                                   <------------------------------------------------rJMSF051D01  
  75   -------------------------------->JMFF040H20                                                                    
                                                    <-------------------------------------------------rJMFF040H20  
  75   ------------------------------------->JMFF039A20                                                               
                                                           <------------------------------------------rJMFF039A20  
  76 --------------------------------->JMSF015K16                                                                     
                                                   <------------------------------------------------rJMSF015K16  
  78 -------------------------------->JMSF012D18                                                                      
                                                   <------------------------------------------------rJMSF012D18  
1371                                                                                        ---------->JMSF022P21     
                                                                                            <-------rJMSF022P21

The following clones don't have the opposite end in this pair.

                                                         <-------------------------------------------rJMSF036F16*     
                                                                               <-------rJMSF005C09*                   
                                                          <-----------------------------------------rJMSF008I04-      
                                                                             -------------------------->JMFN029N12-   
                                                                        <------------rJMSF004E16*                     
                                                   <---------------------------------------------------rJMSF021D03#   
     ----------------------->JMSF017E15#                                                                              
      --------------------->JMSF005E11-                                                                               
                                                         <--------------------rJMSF044H15-                            
                                                     <-----------------------------------------------rJMSF029F03*     
     ---------------------------------------->JMFF049D17-