| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF001E06 | Sequence | 514 | 009546 (8) | gb|ACT82771.1| | 3e-99 | actin, partial [Nicotiana tabacum] | 780 | 009546 (8) | gb|ADE05541.1| | 2e-116 | actin [Liriodendron tulipifera] |
| JMFF006B16 | Sequence | 559 | 009546 (8) | ref|XP_009594162.1| | 6e-111 | PREDICTED: actin-104 [Nicotiana tomentosiformis] | 780 | 009546 (8) | gb|ADE05541.1| | 1e-115 | actin [Liriodendron tulipifera] |
| JMFN011H01 | Sequence | 642 | 009546 (8) | ref|NP_001291342.1| | 6e-149 | uncharacterized protein LOC105159390 [Sesamum indicum] ref|XP_011074741.1| PREDI | |||||
| JMFS064D04 | Sequence | 613 | 009546 (8) | ref|XP_006359824.1| | 2e-49 | PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Solanum tuberosum] | |||||
| JMSF047C24 | Sequence | 658 | 009546 (8) | ref|XP_009787561.1| | 2e-125 | PREDICTED: actin-104 [Nicotiana sylvestris] ref|XP_009787562.1| PREDICTED: actin | 641 | 009546 (8) | tpg|DAA51050.1| | 2e-87 | TPA: putative actin family protein [Zea mays] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig009546============================================1957 689 --------------->JMFF001E06 <---------------------------------------rJMFF001E06 689 ----------------->JMFF006B16 <---------------------------------------rJMFF006B16 726 --------------------------------->JMSF047C24 <---------------------rJMSF047C24
The following clones don't have the opposite end in this pair.
<------------------------------JMFS064D04- -------------------------------->JMFN011H01-