List of clones in pair P017514.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002G13Sequence614000031 (13)gb|AAN07899.1|2e-13020S proteasome alpha 6 subunit [Nicotiana benthamiana]760000031 (13)ref|XP_009614945.1|9e-102PREDICTED: proteasome subunit alpha type-1-B-like [Nicotiana tomentosiformis]
JMFF008G15Sequence536000031 (13)ref|XP_009771200.1|5e-87PREDICTED: proteasome subunit alpha type-1-B-like [Nicotiana sylvestris]760000031 (13)ref|XP_009614945.1|2e-106PREDICTED: proteasome subunit alpha type-1-B-like [Nicotiana tomentosiformis]
JMFF010K17Sequence571000031 (13)gb|AAN07899.1|4e-10020S proteasome alpha 6 subunit [Nicotiana benthamiana]739000031 (13)ref|XP_009614945.1|8e-102PREDICTED: proteasome subunit alpha type-1-B-like [Nicotiana tomentosiformis]
JMFF030I08Sequence442000031 (13)gb|AFK49441.1|2e-69unknown [Lotus japonicus]667000031 (13)ref|XP_004238282.1|9e-84PREDICTED: proteasome subunit alpha type-1-A [Solanum lycopersicum]
JMFF034A21Sequence666000031 (13)ref|XP_004238282.1|1e-81PREDICTED: proteasome subunit alpha type-1-A [Solanum lycopersicum]
JMFS002D01Sequence623000031 (13)ref|XP_004168681.1|4e-80PREDICTED: proteasome subunit alpha type-1-B-like [Cucumis sativus]
JMFS100A09Sequence608000031 (13)ref|XP_009771200.1|2e-137PREDICTED: proteasome subunit alpha type-1-B-like [Nicotiana sylvestris]
JMSF027M24Sequence624000031 (13)ref|XP_009614945.1|2e-117PREDICTED: proteasome subunit alpha type-1-B-like [Nicotiana tomentosiformis]688000031 (13)ref|XP_009614945.1|4e-110PREDICTED: proteasome subunit alpha type-1-B-like [Nicotiana tomentosiformis]

Contig 31 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000031============================================1128         
   1 ---------------------------------------------->JMFF008G15                                                        
                                      <------------------------------------------------------------------rJMFF008G15  
  10  ------------------------------------------------->JMFF010K17                                                    
                                       <----------------------------------------------------------------rJMFF010K17  
  15  -------------------------------------->JMFF030I08                                                               
                                             <----------------------------------------------------------rJMFF030I08  
  70       ----------------------------------------------------->JMFF002G13                                           
                                       <-----------------------------------------------------------------rJMFF002G13  
  97  ------------------------------------------------------>JMSF027M24                                               
                                    <------------------------------------------------------------rJMSF027M24

The following clones don't have the opposite end in this pair.

                                              <----------------------------------------------------------rJMFF034A21- 
        --------------------------------------->JMFS002D01-                                                           
              ----------------------------------------------------->JMFS100A09-