| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF013M04 | Sequence | 593 | 003540 (11) | ref|XP_006353230.1| | 1e-79 | PREDICTED: membrane-associated protein VIPP1, chloroplastic-like [Solanum tuber | |||||
| JMFF046L06 | Sequence | 456 | 003540 (11) | ref|XP_009627205.1| | 7e-46 | PREDICTED: membrane-associated protein VIPP1, chloroplastic-like isoform X1 [Ni | 404 | 003540 (11) | |||
| JMSF005M06 | Sequence | 343 | 003540 (11) | ||||||||
| JMSF018M10 | Sequence | 487 | 003540 (11) | ref|XP_009627205.1| | 3e-37 | PREDICTED: membrane-associated protein VIPP1, chloroplastic-like isoform X1 [Ni | 778 | 003540 (11) | ref|XP_006353230.1| | 1e-94 | PREDICTED: membrane-associated protein VIPP1, chloroplastic-like [Solanum tuber |
| JMSF037E02 | Sequence | 579 | 003540 (11) | ref|XP_009627205.1| | 3e-61 | PREDICTED: membrane-associated protein VIPP1, chloroplastic-like isoform X1 [Ni | 691 | 003540 (11) | ref|XP_006353230.1| | 2e-80 | PREDICTED: membrane-associated protein VIPP1, chloroplastic-like [Solanum tuber |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig003540============================================1594 96 ---------------------------->JMFF046L06 <------------------------rJMFF046L06 264 ----------------------------->JMSF018M10 <----------------------------------------------rJMSF018M10 276 ----------------------------------->JMSF037E02 <------------------------------------------rJMSF037E02
The following clones don't have the opposite end in this pair.
<------------------------------rJMSF005M08* --------------------->JMSF005M06- <---------------------rJMSF004N14* ------------------------------------>JMFF013M04- ----------->JMSF004P16*