| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF006H08 | Sequence | 622 | 006485 (18) | emb|CDP13684.1| | 2e-120 | unnamed protein product [Coffea canephora] | 793 | 006485 (18) | ref|XP_009764692.1| | 2e-118 | PREDICTED: farnesyl pyrophosphate synthase 1-like [Nicotiana sylvestris] |
| JMFF009M20 | Sequence | 574 | 006485 (18) | gb|AAY87903.1| | 1e-109 | farnesyl diphosphate synthase [Panax ginseng] | 660 | 006485 (18) | gb|ACD54843.1| | 3e-87 | farnesyl pyrophosphate syntethase [Olea europaea] |
| JMFF020F17 | Sequence | 571 | 006485 (18) | gb|AFJ52720.1| | 8e-89 | farnesyl pyrophosphate synthase [Mangifera indica] gb|AFJ53077.1| farnesyl pyrop | 750 | 006485 (18) | ref|XP_009594047.1| | 3e-123 | PREDICTED: farnesyl pyrophosphate synthase 1-like [Nicotiana tomentosiformis] |
| JMFF034J21 | Sequence | 577 | 006485 (18) | gb|AFJ52720.1| | 6e-108 | farnesyl pyrophosphate synthase [Mangifera indica] gb|AFJ53077.1| farnesyl pyrop | 651 | 006485 (18) | gb|ACD54843.1| | 3e-87 | farnesyl pyrophosphate syntethase [Olea europaea] |
| JMFF051P01 | Sequence | 603 | 006485 (18) | gb|AFJ52720.1| | 8e-79 | farnesyl pyrophosphate synthase [Mangifera indica] gb|AFJ53077.1| farnesyl pyrop | 493 | 006485 (18) | gb|ACD54843.1| | 8e-60 | farnesyl pyrophosphate syntethase [Olea europaea] |
| JMFN003G17 | Sequence | 587 | 006485 (18) | emb|CDP13684.1| | 3e-116 | unnamed protein product [Coffea canephora] | |||||
| JMFN032N07 | Sequence | 599 | 006485 (18) | gb|ACD54843.1| | 7e-69 | farnesyl pyrophosphate syntethase [Olea europaea] | |||||
| JMFN033D09 | Sequence | 594 | 006485 (18) | emb|CDP13684.1| | 5e-116 | unnamed protein product [Coffea canephora] | |||||
| JMSF019E21 | Sequence | 249 | 006485 (18) | gb|AFO67222.1| | 3e-30 | putative farnesyl diphosphate synthase, partial [Aralia elata] | 792 | 006485 (18) | ref|XP_009594047.1| | 9e-121 | PREDICTED: farnesyl pyrophosphate synthase 1-like [Nicotiana tomentosiformis] |
| JMSF049J08 | Sequence | 685 | 006485 (18) | gb|ADJ68004.1| | 2e-136 | farnesyl diphosphate synthase [Panax quinquefolius] gb|AGK62445.1| farnesyl diph | 738 | 006485 (18) | ref|XP_009594047.1| | 9e-111 | PREDICTED: farnesyl pyrophosphate synthase 1-like [Nicotiana tomentosiformis] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig006485============================================1298 31 ------------------------------------------->JMFF009M20 <-------------------------------------------------rJMFF009M20 31 ------------------------------------------->JMFF034J21 <-------------------------------------------------rJMFF034J21 31 ----------------------------------------------->JMFF006H08 <------------------------------------------------------------rJMFF006H08 36 ------------------>JMSF019E21 <------------------------------------------------------------rJMSF019E21 41 ---------------------------------------------------->JMSF049J08 <--------------------------------------------------------rJMSF049J08 59 -------------------------------------------->JMFF051P01 <-------------------------------------rJMFF051P01 88 ------------------------------------------->JMFF020F17 <---------------------------------------------------------rJMFF020F17
The following clones don't have the opposite end in this pair.
<---------------------------------------------------rJMSF020E21* -------------------------------------------->JMFN003G17- --------------------------------------------->JMFN032N07- -------------------------------------------->JMFN033D09-