clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN007H17 | Sequence | 533 | 005220 (13) | ref|XP_009594550.1| | 1e-42 | PREDICTED: transcription factor UNE12-like, partial [Nicotiana tomentosiformis] | |||||
JMFS001B10 | Sequence | 604 | 005220 (13) | ref|XP_004247636.1| | 2e-89 | PREDICTED: transcription factor UNE12-like [Solanum lycopersicum] | |||||
JMSF024D09 | Sequence | 675 | 005220 (13) | ref|XP_009594550.1| | 1e-53 | PREDICTED: transcription factor UNE12-like, partial [Nicotiana tomentosiformis] | |||||
JMSF029B14 | Sequence | 647 | 005220 (13) | ref|XP_009594550.1| | 2e-47 | PREDICTED: transcription factor UNE12-like, partial [Nicotiana tomentosiformis] | 431 | 005220 (13) | |||
JMSF035G05 | Sequence | 668 | 005220 (13) | ref|XP_009594550.1| | 3e-47 | PREDICTED: transcription factor UNE12-like, partial [Nicotiana tomentosiformis] | |||||
JMSF038A04 | Sequence | 693 | 005220 (13) | ref|XP_009594550.1| | 2e-46 | PREDICTED: transcription factor UNE12-like, partial [Nicotiana tomentosiformis] | 757 | 005220 (13) | ref|XP_006356051.1| | 1e-44 | PREDICTED: transcription factor UNE12-like [Solanum tuberosum] |
JMSF044M09 | Sequence | 791 | 005220 (13) | ref|XP_009594550.1| | 3e-82 | PREDICTED: transcription factor UNE12-like, partial [Nicotiana tomentosiformis] | 243 | 005220 (13) | |||
JMSF051J21 | Sequence | 668 | 005220 (13) | gb|ABB16991.1| | 7e-83 | unknown [Solanum tuberosum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005220============================================1488 5 ------------------------------------------>JMSF029B14 <----------------------------rJMSF029B14 61 --------------------------------------------->JMSF038A04 <--------------------------------------------------rJMSF038A04 199 ---------------------------------------------------->JMSF044M09 <---------------rJMSF044M09
The following clones don't have the opposite end in this pair.
------------------------------------------>JMSF035G05- -------------------------------------------->JMSF024D09- --------------------------------->JMFN007H17- ------------------------------------->JMFS001B10- --------------------------------------------->JMSF038B21* <------------------------------------rJMSF042K06* -------------------------------------------->JMSF051J21-