clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF002F12 | Sequence | 348 | 014058 (13) | ref|XP_009594000.1| | 1e-05 | PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic isoform X2 | 765 | 014058 (13) | ref|XP_011086965.1| | 6e-94 | PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic [Sesamum i |
JMSF026A01 | Sequence | 634 | 014058 (13) | ref|XP_009594000.1| | 1e-59 | PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic isoform X2 | 751 | 014058 (13) | ref|XP_011086965.1| | 3e-85 | PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic [Sesamum i |
JMSF032P17 | Sequence | 645 | 014058 (13) | ref|XP_009594000.1| | 3e-63 | PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic isoform X2 | 728 | 014058 (13) | ref|XP_011086965.1| | 5e-87 | PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic [Sesamum i |
JMSF035K07 | Sequence | 696 | 014058 (13) | ref|XP_009594000.1| | 3e-67 | PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic isoform X2 | 770 | 014058 (13) | ref|XP_011086965.1| | 4e-89 | PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic [Sesamum i |
JMSF039K12 | Sequence | 672 | 014058 (13) | ref|XP_009594000.1| | 1e-65 | PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic isoform X2 | 944 | 014058 (13) | ref|XP_011086965.1| | 4e-117 | PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic [Sesamum i |
JMSF046I08 | Sequence | 746 | 014058 (13) | ref|XP_009594000.1| | 6e-75 | PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic isoform X2 | 785 | 014058 (13) | ref|XP_011086965.1| | 4e-86 | PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic [Sesamum i |
JMSF047I08 | Sequence | 721 | 014058 (13) | ref|XP_011086965.1| | 2e-79 | PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic [Sesamum i |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig014058============================================1592 5 ---------------------------------------->JMSF039K12 <--------------------------------------------------------rJMSF039K12 12 --------------------------------------->JMSF026A01 <----------------------------------------------rJMSF026A01 40 ---------------------------------------------->JMSF046I08 <------------------------------------------------rJMSF046I08 41 --------------------->JMSF002F12 <-----------------------------------------------rJMSF002F12 48 ------------------------------------------->JMSF035K07 <----------------------------------------------rJMSF035K07 48 --------------------------------------->JMSF032P17 <---------------------------------------------rJMSF032P17
The following clones don't have the opposite end in this pair.
<--------------------------------------------rJMSF047I08-