clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF032N11 | Sequence | 632 | 004072 (10) | ref|XP_010101033.1| | 9e-110 | Eukaryotic translation initiation factor 5A-4 [Morus notabilis] gb|EXB86681.1| E | 721 | 004072 (10) | ref|XP_010101033.1| | 5e-109 | Eukaryotic translation initiation factor 5A-4 [Morus notabilis] gb|EXB86681.1| E |
JMFF035C10 | Sequence | 543 | 004072 (10) | gb|AIT51844.1| | 1e-109 | eukaryotic translation initiation factor 5A [Lindernia brevidens] | 694 | 004072 (10) | ref|XP_010101033.1| | 3e-109 | Eukaryotic translation initiation factor 5A-4 [Morus notabilis] gb|EXB86681.1| E |
JMSF013M12 | Sequence | 503 | 004072 (10) | gb|AIT51844.1| | 1e-98 | eukaryotic translation initiation factor 5A [Lindernia brevidens] | 733 | 004072 (10) | ref|XP_010101033.1| | 5e-109 | Eukaryotic translation initiation factor 5A-4 [Morus notabilis] gb|EXB86681.1| E |
JMSF016C19 | Sequence | 414 | 004072 (10) | gb|AFK47838.1| | 6e-77 | unknown [Medicago truncatula] gb|KEH33401.1| eukaryotic translation initiation f | 711 | 004072 (10) | ref|XP_010101033.1| | 4e-109 | Eukaryotic translation initiation factor 5A-4 [Morus notabilis] gb|EXB86681.1| E |
JMSF024G22 | Sequence | 709 | 004072 (10) | ref|XP_010101033.1| | 2e-109 | Eukaryotic translation initiation factor 5A-4 [Morus notabilis] gb|EXB86681.1| E | 649 | 004072 (10) | ref|XP_010101033.1| | 2e-109 | Eukaryotic translation initiation factor 5A-4 [Morus notabilis] gb|EXB86681.1| E |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004072============================================ 717 5 -------------------------------------------------------------------------->JMFF035C10 <-----------------------------------------------------------------------------------------------rJMFF035C10 98 --------------------------------------------------------------------------------->JMSF024G22 <------------------------------------------------------------------------------------------rJMSF024G22 195 --------------------------------------------------------->JMSF016C19 <------------------------------------------------------------------rJMSF016C19 197 --------------------------------------------------------------------->JMSF013M12 <------------------------------------------------------------------------rJMSF013M12 197 --------------------------------------------------------------------------------------->JMFF032N11 <-------------------------------------------------------------------rJMFF032N11
The following clones don't have the opposite end in this pair.