clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF047L24 | Sequence | 584 | 001783 (9) | ref|XP_009804387.1| | 4e-12 | PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic-like [Nicotiana sylvest | 354 | 001783 (9) | |||
JMFN028P12 | Sequence | 595 | 001783 (9) | ref|XP_009804387.1| | 1e-14 | PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic-like [Nicotiana sylvest | |||||
JMSF004G10 | Sequence | 460 | 001783 (9) | emb|CBI32867.3| | 2e-12 | unnamed protein product [Vitis vinifera] | |||||
JMSF021O18 | Sequence | 661 | 001783 (9) | ref|XP_009804387.1| | 2e-14 | PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic-like [Nicotiana sylvest | 525 | 001783 (9) | ref|XP_006339242.1| | 3e-15 | PREDICTED: 50S ribosomal protein 5, chloroplastic-like [Solanum tuberosum] |
JMSF039C03 | Sequence | 694 | 001783 (9) | ref|XP_009804387.1| | 2e-14 | PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic-like [Nicotiana sylvest | 655 | 001783 (9) | ref|XP_009804387.1| | 2e-14 | PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic-like [Nicotiana sylvest |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001783============================================ 771 1 --------------------------------------------------------------------------->JMFF047L24 <---------------------------------------------rJMFF047L24 106 ------------------------------------------------------------------------------------->JMSF021O18 <------------------------------------------------------------------rJMSF021O18 129 ----------------------------------------------------------------------------------------->JMSF039C03 <----------------------------------------------------------------------------------rJMSF039C03
The following clones don't have the opposite end in this pair.
<----------------rJMSF004G12* ---------------------------------------------------------------------------->JMFN028P12- ---------------------------------------------------------->JMSF004G10-