List of clones in pair P017254.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001M15Sequence554001028 (41)ref|XP_009596682.1|5e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]555001028 (41)ref|XP_009596682.1|5e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFF004H13Sequence504001028 (41)ref|XP_009596682.1|2e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]548001028 (41)ref|XP_009596682.1|4e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFF017P19Sequence593001028 (41)ref|XP_009596682.1|7e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]594001028 (41)ref|XP_009596682.1|7e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFF028E14Sequence552001028 (41)ref|XP_009596682.1|5e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]548001028 (41)ref|XP_009596682.1|4e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFF051A13Sequence585001028 (41)ref|XP_009596682.1|6e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]541001028 (41)ref|XP_009596682.1|4e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN003J19Sequence603001028 (41)ref|XP_009596682.1|8e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN004H03Sequence589001028 (41)ref|XP_009596682.1|7e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN004H06Sequence571001028 (41)ref|XP_009596682.1|1e-25PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN007N09Sequence587001028 (41)ref|XP_009596682.1|6e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN008P06Sequence542001028 (41)ref|XP_009596682.1|4e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN009H05Sequence579001028 (41)ref|XP_009596682.1|6e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN010G20Sequence588001028 (41)ref|XP_009596682.1|7e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN010J21Sequence581001028 (41)ref|XP_009596682.1|6e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN012I08Sequence540001028 (41)ref|XP_009596682.1|4e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN012M07Sequence606001028 (41)ref|XP_009596682.1|8e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN014A16Sequence311001028 (41)ref|XP_009596682.1|1e-22PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN025C17Sequence576001028 (41)ref|XP_009596682.1|6e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN029J16Sequence546001028 (41)ref|XP_009596682.1|4e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN029J23Sequence601001028 (41)ref|XP_009596682.1|7e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN030E12Sequence519001028 (41)ref|XP_009596682.1|1e-25PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN030H03Sequence530001028 (41)ref|XP_009596682.1|4e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN030M03Sequence556001028 (41)ref|XP_009596682.1|5e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN031P19Sequence535001028 (41)ref|XP_009596682.1|4e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN032B04Sequence577001028 (41)ref|XP_009596682.1|6e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN034D08Sequence577001028 (41)ref|XP_009596682.1|6e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN034K15Sequence587001028 (41)ref|XP_009596682.1|6e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN035E20Sequence615001028 (41)ref|XP_009596682.1|8e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN037N08Sequence437001028 (41)
JMFN038C24Sequence231001028 (41)
JMFN038K01Sequence593001028 (41)ref|XP_009596682.1|7e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN038N21Sequence556001028 (41)ref|XP_009596682.1|5e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN040K10Sequence542001028 (41)ref|XP_009596682.1|4e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN041P20Sequence585001028 (41)ref|XP_009596682.1|6e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN042D03Sequence574001028 (41)ref|XP_009596682.1|6e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFN044D12Sequence583001028 (41)ref|XP_009596682.1|6e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]
JMFS098A04Sequence496001028 (41)ref|XP_009596682.1|2e-26PREDICTED: late embryogenesis abundant protein Lea5 [Nicotiana tomentosiformis]

Contig 1028 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001028============================================ 619         
  12  -------------------------------------------------------------------------------------------->JMFF051A13         
                <---------------------------------------------------------------------------------------rJMFF051A13  
  47     ---------------------------------------------------------------------------------------------->JMFF017P19    
      <-----------------------------------------------------------------------------------------------rJMFF017P19  
  96     --------------------------------------------------------------------------------->JMFF004H13                 
     <----------------------------------------------------------------------------------------rJMFF004H13  
  96     ---------------------------------------------------------------------------------------->JMFF001M15          
      <---------------------------------------------------------------------------------------rJMFF001M15  
  97     ---------------------------------------------------------------------------------------->JMFF028E14          
      <---------------------------------------------------------------------------------------rJMFF028E14

The following clones don't have the opposite end in this pair.

         ---------------------------------------------------------------------------------------------->JMFN041P20-   
          -------------------------------------------------------------------------------------->JMFN012I08-          
       ----------------------------------------------------------------------------------------------->JMFN038K01-    
          --------------------------------------------------------------------------------------------->JMFN032B04-   
           --------------------------------------------------------------------------------------------->JMFN034D08-  
                     ----------------------------------------------------------------------------------->JMFN030E12-  
           ------------------------------------------------------------------------------------->JMFN029J16-          
          -------------------------------------------------------------------------------------------->JMFN042D03-    
           --------------------------------------------------------------------------------------------->JMFN025C17-  
       ------------------------------------------------------------------------------------------------->JMFN029J23-  
       ------------------------------------>JMFN038C24-                                                               
             ----------------------------->JMFN037N08-                                                                
           -------------------------------------------------------------------------------------------->JMFN004H06-   
          ----------------------------------------------------------------------------------------------->JMFN010G20-  
        ------------------------------------------------------------------------------->JMFS098A04-                   
         --------------------------------------------------------------------------------------->JMFN008P06-          
           ------------------------------------------------------------------------------------->JMFN030H03-          
          -------------------------------------------------------------------------------------->JMFN031P19-          
        ---------------------------------------------------------------------------------------------->JMFN007N09-    
         ---------------------------------------------------------------------------------------------->JMFN010J21-   
                                               ------------------------------------------------->JMFN014A16-          
         ----------------------------------------------------------------------------------------------->JMFN004H03-  
          ----------------------------------------------------------------------------------------------->JMFN034K15-  
       ------------------------------------------------------------------------------------------------->JMFN003J19-  
       ----------------------------------------------------------------------------------------->JMFN038N21-          
       ----------------------------------------------------------------------------------------->JMFN030M03-          
           --------------------------------------------------------------------------------------------->JMFN009H05-  
       -------------------------------------------------------------------------------------------------->JMFN012M07-  
         --------------------------------------------------------------------------------------->JMFN040K10-          
         ---------------------------------------------------------------------------------------------->JMFN044D12-   
                                        ------------------------------------------------------------>JMFN035E20-