List of clones in pair P017178.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005H05Sequence495005456 (29)ref|XP_009767919.1|7e-71PREDICTED: 60S ribosomal protein L5 [Nicotiana sylvestris]780005456 (29)ref|XP_002524558.1|3e-97ribosomal protein L5, putative [Ricinus communis] gb|EEF37766.1| ribosomal prote
JMFF007C23Sequence398005456 (29)ref|XP_009767919.1|1e-44PREDICTED: 60S ribosomal protein L5 [Nicotiana sylvestris]
JMFF009E21Sequence499005456 (29)ref|XP_009767919.1|1e-69PREDICTED: 60S ribosomal protein L5 [Nicotiana sylvestris]683005456 (29)ref|XP_006366807.1|2e-76PREDICTED: 60S ribosomal protein L5-like [Solanum tuberosum]
JMFF014N08Sequence605005456 (29)ref|XP_009767919.1|6e-88PREDICTED: 60S ribosomal protein L5 [Nicotiana sylvestris]690005456 (29)ref|XP_006366807.1|2e-76PREDICTED: 60S ribosomal protein L5-like [Solanum tuberosum]
JMFF015C06Sequence562005456 (29)ref|XP_009767919.1|8e-85PREDICTED: 60S ribosomal protein L5 [Nicotiana sylvestris]685005456 (29)ref|XP_006366807.1|5e-77PREDICTED: 60S ribosomal protein L5-like [Solanum tuberosum]
JMFF019O19Sequence537005456 (29)ref|XP_009767919.1|6e-78PREDICTED: 60S ribosomal protein L5 [Nicotiana sylvestris]722005456 (29)ref|XP_002524558.1|2e-89ribosomal protein L5, putative [Ricinus communis] gb|EEF37766.1| ribosomal prote
JMFF023P23Sequence467005456 (29)ref|XP_009767919.1|9e-63PREDICTED: 60S ribosomal protein L5 [Nicotiana sylvestris]749005456 (29)ref|XP_002524558.1|5e-98ribosomal protein L5, putative [Ricinus communis] gb|EEF37766.1| ribosomal prote
JMFF025B15Sequence525005456 (29)ref|XP_009767919.1|4e-76PREDICTED: 60S ribosomal protein L5 [Nicotiana sylvestris]669005456 (29)ref|XP_006366807.1|3e-82PREDICTED: 60S ribosomal protein L5-like [Solanum tuberosum]
JMFF027L01Sequence580005456 (29)ref|XP_009767919.1|8e-82PREDICTED: 60S ribosomal protein L5 [Nicotiana sylvestris]771005456 (29)ref|XP_002524558.1|2e-98ribosomal protein L5, putative [Ricinus communis] gb|EEF37766.1| ribosomal prote
JMFF030N22Sequence550005456 (29)ref|XP_009767919.1|6e-85PREDICTED: 60S ribosomal protein L5 [Nicotiana sylvestris]703005456 (29)ref|XP_006366807.1|1e-66PREDICTED: 60S ribosomal protein L5-like [Solanum tuberosum]
JMFF046E06Sequence577005456 (29)ref|XP_009767919.1|2e-82PREDICTED: 60S ribosomal protein L5 [Nicotiana sylvestris]517005456 (29)ref|XP_006371546.1|1e-41hypothetical protein POPTR_0019s13040g [Populus trichocarpa] gb|ABK95061.1| unkn
JMFF050P01Sequence619005456 (29)ref|XP_009767919.1|1e-84PREDICTED: 60S ribosomal protein L5 [Nicotiana sylvestris]563005456 (29)ref|XP_006366807.1|3e-63PREDICTED: 60S ribosomal protein L5-like [Solanum tuberosum]
JMFF051D19Sequence520005456 (29)ref|XP_009767919.1|4e-75PREDICTED: 60S ribosomal protein L5 [Nicotiana sylvestris]486005456 (29)ref|XP_006371546.1|4e-43hypothetical protein POPTR_0019s13040g [Populus trichocarpa] gb|ABK95061.1| unkn
JMFN029D07Sequence568005456 (29)ref|XP_006371546.1|1e-44hypothetical protein POPTR_0019s13040g [Populus trichocarpa] gb|ABK95061.1| unkn
JMFN029I12Sequence609005456 (29)ref|XP_006366807.1|1e-71PREDICTED: 60S ribosomal protein L5-like [Solanum tuberosum]
JMSF029D07Sequence654005456 (29)ref|XP_009767919.1|7e-90PREDICTED: 60S ribosomal protein L5 [Nicotiana sylvestris]749005456 (29)ref|XP_002524558.1|6e-97ribosomal protein L5, putative [Ricinus communis] gb|EEF37766.1| ribosomal prote

Contig 5456 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005456============================================1242         
  12  ------------------------------------------->JMFF030N22                                                          
                                                <--------------------------------------------------------rJMFF030N22  
  51 ---------------------------------------------->JMFF046E06                                                        
                                                            <-----------------------------------------rJMFF046E06  
  56 -------------------------------------------->JMFF015C06                                                          
                                             <------------------------------------------------------rJMFF015C06  
  57 --------------------------------------->JMFF009E21                                                               
                                             <------------------------------------------------------rJMFF009E21  
  61  ------------------------------------------------>JMFF014N08                                                     
                                             <-------------------------------------------------------rJMFF014N08  
  66  --------------------------------------->JMFF005H05                                                              
                                      <--------------------------------------------------------------rJMFF005H05  
  72 ------------------------------------------>JMFF019O19                                                            
                                         <---------------------------------------------------------rJMFF019O19  
  84  ---------------------------------------------->JMFF027L01                                                       
                                     <-------------------------------------------------------------rJMFF027L01  
  94  ----------------------------------------->JMFF051D19                                                            
                                                           <--------------------------------------rJMFF051D19  
  96  ------------------------------------------------->JMFF050P01                                                    
                                                     <--------------------------------------------rJMFF050P01  
 106  ----------------------------------------->JMFF025B15                                                            
                                           <-----------------------------------------------------rJMFF025B15  
 107  ------------------------------------>JMFF023P23                                                                 
                                     <-----------------------------------------------------------rJMFF023P23  
 151       ------------------------------------------->JMSF029D07                                                     
                                      <-----------------------------------------------------------rJMSF029D07

The following clones don't have the opposite end in this pair.

     ------------------------------->JMFF007C23-                                                                      
                                                           <------------------------------------------JMFN029D07-     
                                                   <------------------------------------------------JMFN029I12-