clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005O17 | Sequence | 494 | 004727 (12) | ref|XP_009758373.1| | 8e-86 | PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris] | 752 | 004727 (12) | ref|XP_009758373.1| | 3e-85 | PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris] |
JMFF010L06 | Sequence | 543 | 004727 (12) | ref|XP_009758373.1| | 3e-93 | PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris] | 750 | 004727 (12) | ref|XP_009758373.1| | 3e-92 | PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris] |
JMFF019L22 | Sequence | 545 | 004727 (12) | ref|XP_009758373.1| | 3e-93 | PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris] | 731 | 004727 (12) | ref|XP_009758373.1| | 3e-92 | PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris] |
JMFF048L13 | Sequence | 339 | 004727 (12) | ||||||||
JMFN011F12 | Sequence | 613 | 004727 (12) | ref|XP_009758373.1| | 4e-93 | PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris] | |||||
JMFN011I23 | Sequence | 472 | 004727 (12) | ref|XP_006477274.1| | 4e-65 | PREDICTED: probable calcium-binding protein CML13-like [Citrus sinensis] gb|KDO | |||||
JMFN018E03 | Sequence | 640 | 004727 (12) | ref|XP_009758373.1| | 9e-93 | PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris] | |||||
JMFN028L11 | Sequence | 685 | 004727 (12) | ref|XP_009758373.1| | 2e-92 | PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris] | |||||
JMFN030B18 | Sequence | 610 | 004727 (12) | ref|XP_009758373.1| | 7e-93 | PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004727============================================ 817 94 -------------------------------------------------->JMFF005O17 <------------------------------------------------------------------------------------------rJMFF005O17 105 ------------------------------------------------------->JMFF010L06 <-------------------------------------------------------------------------------------------rJMFF010L06 105 -------------------------------------------------------->JMFF019L22 <-----------------------------------------------------------------------------------------rJMFF019L22
The following clones don't have the opposite end in this pair.
---------------------------------------------------------------------------------->JMFN028L11- -------------------------------------------------------------------------->JMFN030B18- ------------------------------------------------------------------------------>JMFN018E03- -------------------------------------------------------------------------->JMFN011F12- <----------------------------------------rJMFF048L13- --------------------------------------------------------->JMFN011I23-