List of clones in pair P017107.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001E02Sequence685003251 (120)ref|XP_004252814.1|2e-102PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF001H15Sequence461003251 (120)ref|NP_001275472.1|7e-78alpha-tubulin-like protein [Solanum tuberosum] gb|ABA46784.1| alpha-tubulin-like649003251 (120)ref|XP_004252814.1|4e-103PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF003J05Sequence251003251 (120)ref|WP_039310890.1|7e-24hypothetical protein, partial [Paenibacillus sp. IHB B 3415] gb|KHL91192.1| hypo705003251 (120)ref|XP_004252814.1|4e-122PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF004O24Sequence546003251 (120)gb|ACU18775.1|7e-100unknown [Glycine max]681003251 (120)ref|XP_004252814.1|2e-100PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF005O22Sequence484003251 (120)ref|NP_001275472.1|4e-84alpha-tubulin-like protein [Solanum tuberosum] gb|ABA46784.1| alpha-tubulin-like711003251 (120)ref|XP_004252814.1|3e-122PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF008B19Sequence562003251 (120)gb|ACN40426.1|2e-103unknown [Picea sitchensis]663003251 (120)ref|XP_004252814.1|3e-100PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF011I22Sequence614003251 (120)gb|ACN40426.1|3e-101unknown [Picea sitchensis]664003251 (120)ref|XP_004252814.1|1e-97PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF012K14Sequence523003251 (120)gb|ACU18775.1|7e-94unknown [Glycine max]712003251 (120)ref|XP_004252814.1|7e-121PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF015C18Sequence577003251 (120)gb|ACN40426.1|1e-109unknown [Picea sitchensis]684003251 (120)gb|AHM93474.1|3e-75alpha-tubulin, partial [Camellia chekiangoleosa]
JMFF016H22Sequence545003251 (120)gb|ACU18775.1|2e-86unknown [Glycine max]766003251 (120)ref|XP_004252814.1|2e-141PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF020D13Sequence594003251 (120)gb|ACN40426.1|2e-100unknown [Picea sitchensis]740003251 (120)ref|XP_004252814.1|2e-120PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF021O06Sequence377003251 (120)gb|AAV33983.1|2e-55alpha tubulin, partial [Pinus taeda] gb|AAV33984.1| alpha tubulin, partial [Pinu593003251 (120)gb|EYU34085.1|1e-89hypothetical protein MIMGU_mgv1a0196712mg, partial [Erythranthe guttata]
JMFF022E03Sequence548003251 (120)gb|ACU18775.1|7e-100unknown [Glycine max]708003251 (120)ref|XP_004252814.1|3e-133PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF022P06Sequence408003251 (120)gb|AAV33983.1|2e-63alpha tubulin, partial [Pinus taeda] gb|AAV33984.1| alpha tubulin, partial [Pinu761003251 (120)ref|XP_004252814.1|8e-121PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF025F10Sequence546003251 (120)gb|ACU18775.1|7e-100unknown [Glycine max]786003251 (120)ref|XP_004252814.1|2e-143PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF025J21Sequence151003251 (120)268003251 (120)gb|AAU21475.1|5e-25alpha-tubulin, partial [Camellia sinensis]
JMFF026O24Sequence458003251 (120)gb|ACU24494.1|4e-77unknown [Glycine max]766003251 (120)ref|XP_004252814.1|7e-136PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF029H21Sequence485003251 (120)ref|NP_001275472.1|4e-84alpha-tubulin-like protein [Solanum tuberosum] gb|ABA46784.1| alpha-tubulin-like709003251 (120)ref|XP_004252814.1|5e-124PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF030F19Sequence377003251 (120)gb|AAV33983.1|2e-55alpha tubulin, partial [Pinus taeda] gb|AAV33984.1| alpha tubulin, partial [Pinu572003251 (120)gb|AFR42026.1|1e-83alpha-tubulin, partial [Populus trichocarpa]
JMFF030H04Sequence482003251 (120)ref|NP_001275472.1|3e-82alpha-tubulin-like protein [Solanum tuberosum] gb|ABA46784.1| alpha-tubulin-like627003251 (120)gb|AAD50627.1|AF106569_15e-76alpha-tubulin [Gossypium hirsutum]
JMFF030K08Sequence440003251 (120)gb|ACU24494.1|4e-72unknown [Glycine max]
JMFF031N18Sequence272003251 (120)ref|XP_007047652.1|3e-29Tubulin alpha-2 chain [Theobroma cacao] gb|EOX91809.1| Tubulin alpha-2 chain [Th798003251 (120)ref|XP_004252814.1|7e-136PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF032J24Sequence584003251 (120)gb|ACN40426.1|3e-101unknown [Picea sitchensis]759003251 (120)ref|XP_004252814.1|9e-137PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF032O23Sequence596003251 (120)gb|ACN40426.1|1e-103unknown [Picea sitchensis]700003251 (120)ref|XP_004252814.1|2e-112PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF032O24Sequence343003251 (120)gb|AAD50628.1|AF106570_15e-70alpha-tubulin [Gossypium hirsutum]
JMFF035O23Sequence538003251 (120)gb|ACN40426.1|1e-97unknown [Picea sitchensis]198003251 (120)
JMFF038H02Sequence483003251 (120)ref|NP_001275472.1|9e-83alpha-tubulin-like protein [Solanum tuberosum] gb|ABA46784.1| alpha-tubulin-like705003251 (120)ref|XP_004252814.1|4e-122PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF039M15Sequence537003251 (120)dbj|BAG70024.1|4e-126alpha tubulin [Salicornia europaea]716003251 (120)ref|XP_004252814.1|3e-111PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF040J22Sequence600003251 (120)gb|ACN40426.1|2e-99unknown [Picea sitchensis]726003251 (120)ref|XP_004252814.1|4e-142PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF040L16Sequence563003251 (120)gb|ACN40426.1|2e-102unknown [Picea sitchensis]741003251 (120)ref|XP_004252814.1|2e-99PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFF044C14Sequence622003251 (120)gb|ACN40426.1|1e-100unknown [Picea sitchensis]403003251 (120)gb|ETL99780.1|8e-25tubulin alpha chain [Phytophthora parasitica]
JMFF046H14Sequence482003251 (120)ref|NP_001275472.1|1e-77alpha-tubulin-like protein [Solanum tuberosum] gb|ABA46784.1| alpha-tubulin-like386003251 (120)gb|KJB58757.1|8e-26hypothetical protein B456_009G224800 [Gossypium raimondii]
JMFF046N18Sequence457003251 (120)gb|ACU24494.1|5e-77unknown [Glycine max]437003251 (120)gb|AAU21475.1|2e-35alpha-tubulin, partial [Camellia sinensis]
JMFF047E03Sequence249003251 (120)ref|WP_039310890.1|1e-21hypothetical protein, partial [Paenibacillus sp. IHB B 3415] gb|KHL91192.1| hypo410003251 (120)gb|AAU21475.1|2e-32alpha-tubulin, partial [Camellia sinensis]
JMFF050F03Sequence620003251 (120)gb|ACN40426.1|9e-103unknown [Picea sitchensis]503003251 (120)gb|AAD50628.1|AF106570_16e-63alpha-tubulin [Gossypium hirsutum]
JMFF051K11Sequence630003251 (120)ref|WP_039310890.1|5e-77hypothetical protein, partial [Paenibacillus sp. IHB B 3415] gb|KHL91192.1| hypo539003251 (120)gb|AAD50628.1|AF106570_12e-61alpha-tubulin [Gossypium hirsutum]
JMFN002D09Sequence557003251 (120)gb|AAD50628.1|AF106570_12e-72alpha-tubulin [Gossypium hirsutum]
JMFN003P02Sequence622003251 (120)dbj|BAG70024.1|2e-143alpha tubulin [Salicornia europaea]
JMFN003P23Sequence615003251 (120)gb|EYU34085.1|9e-86hypothetical protein MIMGU_mgv1a0196712mg, partial [Erythranthe guttata]
JMFN004A05Sequence547003251 (120)gb|AAD50628.1|AF106570_19e-58alpha-tubulin [Gossypium hirsutum]
JMFN006I17Sequence642003251 (120)gb|ACN40426.1|3e-111unknown [Picea sitchensis]
JMFN009N21Sequence383003251 (120)ref|XP_004252814.1|2e-89PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFN010F24Sequence630003251 (120)gb|EYU34085.1|9e-88hypothetical protein MIMGU_mgv1a0196712mg, partial [Erythranthe guttata]
JMFN034O20Sequence623003251 (120)gb|AHM93474.1|2e-150alpha-tubulin, partial [Camellia chekiangoleosa]
JMFN035D19Sequence629003251 (120)ref|XP_004252814.1|1e-124PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMFN038B06Sequence626003251 (120)gb|AHM93474.1|5e-150alpha-tubulin, partial [Camellia chekiangoleosa]
JMFN040N07Sequence606003251 (120)gb|ACN40426.1|5e-107unknown [Picea sitchensis]
JMFS024D06Sequence633003251 (120)gb|ACN40426.1|5e-109unknown [Picea sitchensis]
JMFS031C04Sequence616003251 (120)gb|ACN40426.1|8e-105unknown [Picea sitchensis]
JMFS035C12Sequence602003251 (120)gb|AHJ80818.1|2e-125Tua1, partial [Eragrostis tef]
JMFS051F08Sequence587003251 (120)gb|ACU18775.1|1e-98unknown [Glycine max]
JMFS092A07Sequence615003251 (120)gb|AHJ80818.1|8e-128Tua1, partial [Eragrostis tef]
JMFS093A04Sequence600003251 (120)gb|ACN40426.1|7e-108unknown [Picea sitchensis]
JMFS100B08Sequence606003251 (120)gb|ACN40426.1|1e-109unknown [Picea sitchensis]
JMFS111E05Sequence627003251 (120)gb|AIW52354.1|6e-133alpha tubulin, partial [Portulaca oleracea]
JMFS144D06Sequence641003251 (120)gb|ACN40426.1|1e-110unknown [Picea sitchensis]
JMSF003K06Sequence416003251 (120)gb|ACU24494.1|2e-65unknown [Glycine max]756003251 (120)ref|XP_004252814.1|7e-139PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMSF006A14Sequence266003251 (120)ref|XP_007047652.1|7e-12Tubulin alpha-2 chain [Theobroma cacao] gb|EOX91809.1| Tubulin alpha-2 chain [Th
JMSF010G10Sequence407003251 (120)gb|AAV33983.1|1e-62alpha tubulin, partial [Pinus taeda] gb|AAV33984.1| alpha tubulin, partial [Pinu753003251 (120)ref|XP_004252814.1|2e-138PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMSF012L15Sequence449003251 (120)gb|AAO73546.1|2e-25alpha-tubulin [Ceratopteris richardii] gb|AAW57307.1| alpha-tubulin [Ceratopteri396003251 (120)gb|KJB58756.1|9e-26hypothetical protein B456_009G224800 [Gossypium raimondii]
JMSF017L20Sequence458003251 (120)gb|ACU24494.1|5e-77unknown [Glycine max]767003251 (120)ref|XP_004252814.1|7e-143PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMSF020D01Sequence696003251 (120)gb|ACN40426.1|8e-122unknown [Picea sitchensis]794003251 (120)ref|XP_004252814.1|1e-134PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMSF021M11Sequence668003251 (120)gb|ACN40426.1|4e-114unknown [Picea sitchensis]776003251 (120)ref|XP_004252814.1|2e-132PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMSF021O05Sequence671003251 (120)gb|ACN40426.1|2e-115unknown [Picea sitchensis]754003251 (120)ref|XP_004252814.1|6e-143PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMSF031C12Sequence694003251 (120)gb|ACN40426.1|8e-122unknown [Picea sitchensis]680003251 (120)gb|AHM93474.1|3e-91alpha-tubulin, partial [Camellia chekiangoleosa]
JMSF042L24Sequence818003251 (120)gb|ACN40426.1|7e-153unknown [Picea sitchensis]691003251 (120)ref|XP_004252814.1|4e-121PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMSF043B17Sequence641003251 (120)gb|ACN40426.1|5e-108unknown [Picea sitchensis]737003251 (120)ref|XP_004252814.1|2e-122PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMSF046M08Sequence775003251 (120)gb|ACN40426.1|3e-141unknown [Picea sitchensis]
JMSF048D24Sequence677003251 (120)gb|ACN40426.1|2e-117unknown [Picea sitchensis]693003251 (120)ref|XP_004252814.1|2e-103PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]
JMSF050J19Sequence673003251 (120)gb|ACN40426.1|3e-116unknown [Picea sitchensis]765003251 (120)ref|XP_004252814.1|9e-130PREDICTED: tubulin alpha-2 chain-like [Solanum lycopersicum]

Contig 3251 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003251============================================1740         
   1 ------------------------------->JMFF040L16                                                                       
                                                              <------------------------------------------rJMFF040L16  
  49 --------------------------->JMFF030H04                                                                           
                                                                   <----------------------------------rJMFF030H04  
  53 ----------------------------------->JMFF044C14                                                                   
                                                                               <-----------------------rJMFF044C14  
  57 ------------------------------>JMFF004O24                                                                        
                                                              <---------------------------------------rJMFF004O24  
  58 ---------------------->JMFF022P06                                                                                
                                                          <-------------------------------------------rJMFF022P06  
  64 -------------------------------------->JMSF048D24                                                                
                                                             <---------------------------------------rJMSF048D24  
  73 -------------------------->JMFF046H14                                                                            
                                                                              <----------------------rJMFF046H14  
  77 --------------->JMFF031N18                                                                                       
                                                      <---------------------------------------------rJMFF031N18  
  79 ---------------------------------->JMFF011I22                                                                    
                                                              <-------------------------------------rJMFF011I22  
  80 ------------------------------->JMFF008B19                                                                       
                                                              <--------------------------------------rJMFF008B19  
  87 ------------------------->JMFF046N18                                                                             
                                                                            <-----------------------rJMFF046N18  
  89 ------------->JMFF047E03                                                                                         
                                                                             <----------------------rJMFF047E03  
  89 --------------------------------------->JMSF020D01                                                               
                                                      <---------------------------------------------rJMSF020D01  
  90 ---------------------------------->JMFF051K11                                                                    
                                                                       <----------------------------rJMFF051K11  
  92 ----------------------------------->JMFF050F03                                                                   
                                                                       <----------------------------rJMFF050F03  
  93  --------------------------------->JMFF020D13                                                                    
                                                          <------------------------------------------rJMFF020D13  
  96 -------------------------------------->JMSF050J19                                                                
                                                        <-------------------------------------------rJMSF050J19  
  97 ------------------------------------->JMSF021M11                                                                 
                                                       <--------------------------------------------rJMSF021M11  
 100 -------------------------->JMFF001H15                                                                            
                                                              <-------------------------------------rJMFF001H15  
 108 ----------------------------->JMFF012K14                                                                         
                                                         <-----------------------------------------rJMFF012K14  
 109 --------------------->JMFF030F19                                                                                 
                                                                  <--------------------------------rJMFF030F19  
 110 --------------------->JMFF021O06                                                                                 
                                                                <---------------------------------rJMFF021O06  
 111 --------------------------->JMFF005O22                                                                           
                                                         <----------------------------------------rJMFF005O22  
 115 ------------------------->JMFF026O24                                                                             
                                                      <-------------------------------------------rJMFF026O24  
 116 -------------->JMFF003J05                                                                                        
                                                          <----------------------------------------rJMFF003J05  
 117 --------------------------->JMFF029H21                                                                           
                                                         <----------------------------------------rJMFF029H21  
 117 --------------------------->JMFF038H02                                                                           
                                                         <----------------------------------------rJMFF038H02  
 117 ------------------------------>JMFF025F10                                                                        
                                                     <---------------------------------------------rJMFF025F10  
 125     -------------------------------->JMFF015C18                                                                  
                                                              <---------------------------------------rJMFF015C18  
 128 ------------------------------>JMFF016H22                                                                        
                                                     <-------------------------------------------rJMFF016H22  
 128 ---------------------------------------------->JMSF042L24                                                        
                                                          <---------------------------------------rJMSF042L24  
 131 ---------------------->JMSF010G10                                                                                
                                                      <-------------------------------------------rJMSF010G10  
 131 ------------------------->JMSF017L20                                                                             
                                                     <--------------------------------------------rJMSF017L20  
 136  --------------------------------->JMFF032O23                                                                    
                                                          <----------------------------------------rJMFF032O23  
 137 --------------------------------------->JMSF031C12                                                               
                                                          <--------------------------------------rJMSF031C12  
 144 ------------------------------>JMFF035O23                                                                        
                                                                                     <-----------rJMFF035O23  
 144 -------------------------------------->JMSF021O05                                                                
                                                     <-------------------------------------------rJMSF021O05  
 146   --------------------------------->JMFF032J24                                                                   
                                                      <-------------------------------------------rJMFF032J24  
 147 ----------------------->JMSF003K06                                                                               
                                                      <------------------------------------------rJMSF003K06  
 147 ------------------------------------>JMSF043B17                                                                  
                                                        <----------------------------------------rJMSF043B17  
 160 ------------------------------>JMFF022E03                                                                        
                                                       <----------------------------------------rJMFF022E03  
 183  ---------------------------------->JMFF040J22                                                                   
                                                     <-----------------------------------------rJMFF040J22  
 264 -------->JMFF025J21                                                                                              
                                                                           <--------------rJMFF025J21  
 697                                     ------------------------------>JMFF039M15                                    
                                                            <-----------------------------------------rJMFF039M15  
1344                                                                          ------------------------->JMSF012L15    
                                                                              <----------------------rJMSF012L15

The following clones don't have the opposite end in this pair.

                                                                 ------------------------------------>JMFN010F24-     
                                                              <--------------------------------------rJMFF038P01#     
      ------------------------------------>JMFS024D06-                                                                
       ---------------------------------->JMFN040N07-                                                                 
                                                              <---------------------------------------rJMFF001E02-    
      ----------------------------------->JMFS031C04-                                                                 
      ------------------------------------>JMFS144D06-                                                                
     ----------------------------------------------->JMSF041F20*                                                      
                                                          <------------------------------------------rJMFF008C24*     
      ------------------------------------>JMFN006I17-                                                                
                                                                        ------------------------------>JMFN004A05-    
                                ----------------------------------->JMFS111E05-                                       
                                                         <----------------------------------------rJMFF038K12*        
                                          ----------------------------------->JMFN038B06-                             
     --------------------->JMSF004E02*                                                                                
                                      ----------------------------------->JMFN003P02-                                 
                                                         --------------------->JMFN009N21-                            
                                                         ----------------------------------->JMFN035D19-              
     ------------------------>JMFF030K08-                                                                             
                                                                    ------------------------------->JMFN002D09-       
                                              ----------------------------------->JMFN034O20-                         
        ---------------------------------->JMFS093A04-                                                                
     -------------------------------------------->JMSF046M08-                                                         
     ----------->JMSF006A14-                                                                                          
                                                                     <-------------------rJMFF032O24-                 
                                                                  <---------------------------------JMFN003P23-       
                           ----------------------------------->JMFS092A07-                                            
                         ---------------------------------->JMFS035C12-                                               
      --------------------------------->JMFS051F08-                                                                   
       ---------------------------------->JMFS100B08-