List of clones in pair P017083.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002K09Sequence520003991 (30)ref|XP_009603391.1|5e-66PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]714003991 (30)ref|XP_009603391.1|1e-85PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]
JMFF005K20Sequence500003991 (30)ref|XP_009603391.1|1e-43PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]703003991 (30)ref|XP_009603391.1|3e-84PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]
JMFF010K05Sequence568003991 (30)ref|XP_009603391.1|3e-86PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]489003991 (30)ref|XP_009603391.1|6e-68PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]
JMFF011G16Sequence583003991 (30)ref|XP_009603391.1|1e-69PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]686003991 (30)ref|XP_009603391.1|5e-75PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]
JMFF014B10Sequence441003991 (30)ref|XP_009603391.1|3e-48PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]601003991 (30)ref|XP_009603391.1|1e-74PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]
JMFF017L06Sequence589003991 (30)ref|XP_009799203.1|3e-59PREDICTED: pectinesterase 1-like [Nicotiana sylvestris]775003991 (30)ref|XP_009603391.1|4e-85PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]
JMFF019P23Sequence520003991 (30)ref|XP_006357906.1|8e-64PREDICTED: 21 kDa protein-like [Solanum tuberosum]762003991 (30)ref|XP_009603391.1|4e-85PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]
JMFF024O18Sequence447003991 (30)ref|XP_009603391.1|7e-49PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]781003991 (30)ref|XP_009603391.1|5e-85PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]
JMFF025D23Sequence517003991 (30)ref|XP_006357906.1|3e-66PREDICTED: 21 kDa protein-like [Solanum tuberosum]761003991 (30)ref|XP_009603391.1|4e-85PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]
JMFF039N16Sequence562003991 (30)ref|XP_009799203.1|9e-50PREDICTED: pectinesterase 1-like [Nicotiana sylvestris]610003991 (30)ref|XP_009603391.1|4e-60PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]
JMFF046B15Sequence514003991 (30)ref|XP_006357906.1|3e-64PREDICTED: 21 kDa protein-like [Solanum tuberosum]401003991 (30)gb|KDP22406.1|1e-31hypothetical protein JCGZ_26237 [Jatropha curcas]
JMFF048C18Sequence248003991 (30)ref|XP_004240754.1|6e-12PREDICTED: 21 kDa protein-like [Solanum lycopersicum]
JMFN007K21Sequence631003991 (30)ref|XP_009603391.1|3e-86PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]
JMFN008P21Sequence611003991 (30)ref|XP_009603391.1|1e-77PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]
JMFN009E03Sequence247003991 (30)
JMFN009E15Sequence613003991 (30)ref|XP_009603391.1|3e-86PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]
JMFN032J06Sequence630003991 (30)ref|XP_009603391.1|4e-86PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]
JMFN032M24Sequence603003991 (30)ref|XP_009603391.1|2e-86PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]
JMFN043L16Sequence606003991 (30)ref|XP_009603391.1|3e-72PREDICTED: 21 kDa protein-like [Nicotiana tomentosiformis]

Contig 3991 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003991============================================ 846         
  45  ------------------------------------------------------------>JMFF046B15                                         
                                                     <-----------------------------------------------rJMFF046B15  
  63  --------------------------------------------------->JMFF014B10                                                  
                           <----------------------------------------------------------------------rJMFF014B10  
  67  ---------------------------------------------------------->JMFF005K20                                           
               <----------------------------------------------------------------------------------rJMFF005K20  
  69  ----------------------------------------------------------------->JMFF039N16                                    
                         <-----------------------------------------------------------------------rJMFF039N16  
  72  ---------------------------------------------------->JMFF024O18                                                 
      <------------------------------------------------------------------------------------------rJMFF024O18  
  72  ------------------------------------------------------------>JMFF019P23                                         
       <-----------------------------------------------------------------------------------------rJMFF019P23  
  72  --------------------------------------------------------------------->JMFF017L06                                
     <-------------------------------------------------------------------------------------------rJMFF017L06  
  74  ------------------------------------------------------------->JMFF002K09                                        
            <------------------------------------------------------------------------------------rJMFF002K09  
  75  ------------------------------------------------------------>JMFF025D23                                         
       <-----------------------------------------------------------------------------------------rJMFF025D23  
  75  -------------------------------------------------------------------->JMFF011G16                                 
               <---------------------------------------------------------------------------------rJMFF011G16  
 323            <------------------------------------------------------------------JMFF010K05                         
                      --------------------------------------------------------->rJMFF010K05

The following clones don't have the opposite end in this pair.

        ------------------------------------------------------------------------>JMFN009E15-                          
          -------------------------------------------------------------------------->JMFN007K21-                      
        ----------------------------------------------------------------------->JMFN032M24-                           
      ---------------------------->JMFF048C18-                                                                        
        ------------------------------------------------------------------------>JMFN008P21-                          
        -------------------------------------------------------------------------->JMFN032J06-                        
       ----------------------------------------------------------------------->JMFN043L16-                            
                                                                            <----------------------------JMFN009E03-