List of clones in pair P017076.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004G13Sequence520001747 (31)emb|CDP13948.1|3e-58unnamed protein product [Coffea canephora]620001747 (31)ref|XP_010322279.1|8e-50PREDICTED: wound-induced protein 1 [Solanum lycopersicum]
JMFF019D19Sequence605001747 (31)ref|XP_009760710.1|2e-71PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]756001747 (31)ref|XP_010322279.1|1e-52PREDICTED: wound-induced protein 1 [Solanum lycopersicum]
JMFF024C23Sequence526001747 (31)emb|CDP13948.1|3e-61unnamed protein product [Coffea canephora]709001747 (31)ref|XP_010322279.1|2e-67PREDICTED: wound-induced protein 1 [Solanum lycopersicum]
JMFF032F21Sequence444001747 (31)ref|XP_009760710.1|1e-40PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]274001747 (31)ref|XP_010322279.1|3e-08PREDICTED: wound-induced protein 1 [Solanum lycopersicum]
JMFF040F16Sequence553001747 (31)ref|XP_009760710.1|3e-64PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]700001747 (31)ref|XP_010322279.1|5e-66PREDICTED: wound-induced protein 1 [Solanum lycopersicum]
JMFF041I19Sequence645001747 (31)ref|XP_009760710.1|2e-71PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]563001747 (31)ref|XP_009785319.1|2e-36PREDICTED: wound-induced protein 1 [Nicotiana sylvestris]
JMFN003H22Sequence630001747 (31)ref|XP_009760710.1|2e-71PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]
JMFN003K02Sequence626001747 (31)ref|XP_009760710.1|2e-71PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]
JMFN007L21Sequence398001747 (31)ref|XP_010322279.1|6e-10PREDICTED: wound-induced protein 1 [Solanum lycopersicum]
JMFN008F07Sequence653001747 (31)ref|XP_009760710.1|2e-71PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]
JMFN010A06Sequence621001747 (31)emb|CDP13948.1|3e-71unnamed protein product [Coffea canephora]
JMFN016H12Sequence577001747 (31)ref|XP_009785319.1|3e-36PREDICTED: wound-induced protein 1 [Nicotiana sylvestris]
JMFN018H01Sequence570001747 (31)ref|XP_009760710.1|8e-72PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]
JMFN018J09Sequence618001747 (31)ref|XP_009760710.1|1e-71PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]
JMFN020I11Sequence612001747 (31)ref|XP_009760710.1|1e-71PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]
JMFN028H02Sequence657001747 (31)ref|XP_009760710.1|2e-71PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]
JMFN032D19Sequence622001747 (31)ref|XP_009760710.1|3e-71PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]
JMFN034E18Sequence612001747 (31)ref|XP_009760710.1|1e-71PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]
JMFN034N11Sequence624001747 (31)ref|XP_009760710.1|2e-71PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]
JMFN035H22Sequence559001747 (31)ref|XP_009760710.1|2e-71PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]
JMFN038L18Sequence621001747 (31)emb|CDP13948.1|8e-72unnamed protein product [Coffea canephora]
JMFN043B11Sequence621001747 (31)ref|XP_009760710.1|2e-71PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]
JMFN046I06Sequence558001747 (31)ref|XP_009760710.1|7e-72PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]
JMFN046N12Sequence613001747 (31)ref|XP_009760710.1|1e-71PREDICTED: wound-induced protein 1-like, partial [Nicotiana sylvestris]

Contig 1747 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001747============================================ 899         
  36  ------------------------------------------------------------------->JMFF019D19                                  
                  <-----------------------------------------------------------------------------------rJMFF019D19  
  55 ------------------------------------------------------------->JMFF040F16                                         
                     <-----------------------------------------------------------------------------rJMFF040F16  
  60  -------------------------------------------------------->JMFF004G13                                             
                              <--------------------------------------------------------------------rJMFF004G13  
  60  ---------------------------------------------------------->JMFF024C23                                           
                    <------------------------------------------------------------------------------rJMFF024C23  
  61      ---------------------------------------------------------------------->JMFF041I19                           
                                         <--------------------------------------------------------------rJMFF041I19  
 412                            ------------------------------------------------>JMFF032F21                           
                                                         <----------------------------rJMFF032F21

The following clones don't have the opposite end in this pair.

                                         --------------------------------------------------------------->JMFN016H12-  
                 --------------------------------------------------------------------->JMFN034N11-                    
        -------------------------------------------------------------------->JMFN032D19-                              
       ------------------------------------------------------------------->JMFN020I11-                                
       -------------------------------------------------------------------->JMFN043B11-                               
                                                           ------------------------------------------->JMFN007L21-    
              -------------------------------------------------------------------->JMFN010A06-                        
                 ------------------------------------------------------------->JMFN046I06-                            
                 <--------------------------------------------------------------------------------rJMSF035G01*        
           ------------------------------------------------------------------->JMFN034E18-                            
        ---------------------------------------------------------------->JMFN046N12-                                  
              -------------------------------------------------------------------->JMFN038L18-                        
        --------------------------------------------------------------->JMFN018H01-                                   
        --------------------------------------------------------------------->JMFN003H22-                             
              ------------------------------------------------------------------------>JMFN008F07-                    
          --------------------------------------------------------------------->JMFN003K02-                           
           ------------------------------------------------------------------------>JMFN028H02-                       
       -------------------------------------------------------------------->JMFN018J09-                               
          ------------------------------------------------------------->JMFN035H22-