clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF018L11 | Sequence | 197 | 006838 (9) | 753 | 006838 (9) | ref|XP_009762424.1| | 286 | PREDICTED: uncharacterized protein LOC104214458 [Nicotiana sylvestris] | |||
JMFF026L16 | Sequence | 526 | 006838 (9) | ref|XP_006342327.1| | 60.1 | PREDICTED: uncharacterized protein LOC102590608 [Solanum tuberosum] | 719 | 006838 (9) | ref|XP_009762424.1| | 258 | PREDICTED: uncharacterized protein LOC104214458 [Nicotiana sylvestris] |
JMSF007L02 | Sequence | 456 | 006838 (9) | ref|XP_009762424.1| | 201 | PREDICTED: uncharacterized protein LOC104214458 [Nicotiana sylvestris] | 725 | 006838 (9) | ref|XP_009762424.1| | 299 | PREDICTED: uncharacterized protein LOC104214458 [Nicotiana sylvestris] |
JMSF045A22 | Sequence | 683 | 006838 (9) | ref|XP_009762424.1| | 290 | PREDICTED: uncharacterized protein LOC104214458 [Nicotiana sylvestris] | 771 | 006838 (9) | ref|XP_009762424.1| | 312 | PREDICTED: uncharacterized protein LOC104214458 [Nicotiana sylvestris] |
JMSF046A22 | Sequence | 105 | 006838 (9) | emb|CDP03133.1| | 3e-06 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig006838============================================ 945 92 ----------------------------------------------------------------------->JMSF045A22 <-------------------------------------------------------------------------------rJMSF045A22 107 ----------------------------------->JMFF026L16 <----------------------------------------------------rJMFF026L16 159 -------------------->JMFF018L11 <-------------------------------------------------------------------------------rJMFF018L11 177 ---------------------------------------------->JMSF007L02 <----------------------------------------------------------------------------rJMSF007L02
The following clones don't have the opposite end in this pair.
<----------rJMSF046A22-