| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF015C07 | Sequence | 121 | 001469 (20) | 515 | 001469 (20) | ref|XP_004252600.1| | 7e-78 | PREDICTED: histone H3.2-like [Solanum lycopersicum] ref|XP_006364137.1| PREDICTE | |||
| JMFF016K08 | Sequence | 122 | 001469 (20) | ||||||||
| JMFF017I06 | Sequence | 472 | 001469 (20) | ref|XP_006301260.1| | 2e-86 | hypothetical protein CARUB_v10021660mg, partial [Capsella rubella] gb|EOA34158.1 | 624 | 001469 (20) | ref|XP_006301260.1| | 6e-90 | hypothetical protein CARUB_v10021660mg, partial [Capsella rubella] gb|EOA34158.1 |
| JMFF030E12 | Sequence | 470 | 001469 (20) | ref|XP_006301260.1| | 4e-86 | hypothetical protein CARUB_v10021660mg, partial [Capsella rubella] gb|EOA34158.1 | 532 | 001469 (20) | gb|KGN66469.1| | 2e-87 | hypothetical protein Csa_1G612925 [Cucumis sativus] |
| JMFF030K06 | Sequence | 471 | 001469 (20) | ref|XP_006301260.1| | 4e-86 | hypothetical protein CARUB_v10021660mg, partial [Capsella rubella] gb|EOA34158.1 | 521 | 001469 (20) | ref|XP_004252600.1| | 5e-87 | PREDICTED: histone H3.2-like [Solanum lycopersicum] ref|XP_006364137.1| PREDICTE |
| JMFF033E18 | Sequence | 540 | 001469 (20) | ref|XP_006301260.1| | 6e-91 | hypothetical protein CARUB_v10021660mg, partial [Capsella rubella] gb|EOA34158.1 | |||||
| JMFF037E16 | Sequence | 582 | 001469 (20) | ref|XP_006301260.1| | 1e-90 | hypothetical protein CARUB_v10021660mg, partial [Capsella rubella] gb|EOA34158.1 | 528 | 001469 (20) | gb|KGN66469.1| | 2e-86 | hypothetical protein Csa_1G612925 [Cucumis sativus] |
| JMFF043A23 | Sequence | 637 | 001469 (20) | ref|XP_006301260.1| | 2e-90 | hypothetical protein CARUB_v10021660mg, partial [Capsella rubella] gb|EOA34158.1 | 589 | 001469 (20) | ref|XP_004252600.1| | 3e-87 | PREDICTED: histone H3.2-like [Solanum lycopersicum] ref|XP_006364137.1| PREDICTE |
| JMFN006N13 | Sequence | 598 | 001469 (20) | ref|XP_006301260.1| | 1e-90 | hypothetical protein CARUB_v10021660mg, partial [Capsella rubella] gb|EOA34158.1 | |||||
| JMFN008I05 | Sequence | 600 | 001469 (20) | ref|XP_006301260.1| | 1e-90 | hypothetical protein CARUB_v10021660mg, partial [Capsella rubella] gb|EOA34158.1 | |||||
| JMFN034L07 | Sequence | 602 | 001469 (20) | ref|XP_006301260.1| | 1e-90 | hypothetical protein CARUB_v10021660mg, partial [Capsella rubella] gb|EOA34158.1 | |||||
| JMSF045A16 | Sequence | 634 | 001469 (20) | ref|XP_006301260.1| | 2e-90 | hypothetical protein CARUB_v10021660mg, partial [Capsella rubella] gb|EOA34158.1 | 594 | 001469 (20) | ref|XP_006301260.1| | 1e-90 | hypothetical protein CARUB_v10021660mg, partial [Capsella rubella] gb|EOA34158.1 |
| JMSF047A16 | Sequence | 235 | 001469 (20) | ref|XP_003594840.1| | 1e-38 | Histone H3, partial [Medicago truncatula] | |||||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig001469============================================ 681 2 ------------------------------------------------------------------------>JMFF043A23 <-------------------------------------------------------------------------------------rJMFF043A23 66 -------------------------------------------------------------------->JMFF017I06 <-----------------------------------------------------------------------------------------rJMFF017I06 83 -------------------------------------------------------------------->JMFF030K06 <----------------------------------------------------------------------------rJMFF030K06 84 -------------------------------------------------------------------->JMFF030E12 <-----------------------------------------------------------------------------rJMFF030E12 87 ------------------------------------------------------------------------------------>JMFF037E16 <-----------------------------------------------------------------------------rJMFF037E16 88 ------------------------------------------------------------------------>JMSF045A16 <--------------------------------------------------------------------------------------rJMSF045A16 89 ----------------->JMFF015C07 <--------------------------------------------------------------------------rJMFF015C07
The following clones don't have the opposite end in this pair.
<----------------------------------rJMSF047A16- ------------------------------------------------------------------------------>JMFF033E18- ---------------->JMFF016K08- --------------------------------------------------------------------------------------->JMFN008I05- --------------------------------------------------------------------------------------->JMFN034L07- --------------------------------------------------------------------------------------->JMFN006N13-