clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF002G05 | Sequence | 462 | 009711 (8) | ref|XP_009597452.1| | 108 | PREDICTED: uncharacterized protein LOC104093419 [Nicotiana tomentosiformis] | 735 | 009711 (8) | gb|KDP44049.1| | 5e-50 | hypothetical protein JCGZ_05516 [Jatropha curcas] |
JMFF006A07 | Sequence | 470 | 009711 (8) | ref|XP_009597452.1| | 65.5 | PREDICTED: uncharacterized protein LOC104093419 [Nicotiana tomentosiformis] | 710 | 009711 (8) | gb|KDP44049.1| | 4e-50 | hypothetical protein JCGZ_05516 [Jatropha curcas] |
JMFF027H17 | Sequence | 544 | 009711 (8) | ref|XP_004241275.1| | 99.8 | PREDICTED: uncharacterized protein LOC101262623 [Solanum lycopersicum] | 751 | 009711 (8) | gb|KDP44049.1| | 6e-50 | hypothetical protein JCGZ_05516 [Jatropha curcas] |
JMSF011O13 | Sequence | 215 | 009711 (8) | 778 | 009711 (8) | gb|KDP44049.1| | 8e-50 | hypothetical protein JCGZ_05516 [Jatropha curcas] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009711============================================ 817 3 ------------------------------------------------------------------>JMFF027H17 <-------------------------------------------------------------------------------------------rJMFF027H17 20 -------------------------------------------------------->JMFF006A07 <--------------------------------------------------------------------------------------rJMFF006A07 20 -------------------------------------------------------->JMFF002G05 <-----------------------------------------------------------------------------------------rJMFF002G05 50 ------------------------->JMSF011O13 <-------------------------------------------------------------------------------------------rJMSF011O13
The following clones don't have the opposite end in this pair.