List of clones in pair P016947.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012I19Sequence442001016 (64)dbj|BAH28852.1|4e-79glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]750001016 (64)dbj|BAH28852.1|3e-118glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF013J16Sequence575001016 (64)gb|AFD62802.1|1e-101GAPDH2 [Ipomoea purpurea]741001016 (64)dbj|BAH28852.1|2e-118glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF013K19Sequence579001016 (64)gb|AFD62802.1|4e-103GAPDH2 [Ipomoea purpurea]689001016 (64)dbj|BAH28852.1|2e-104glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF015K01Sequence642001016 (64)gb|AFD62802.1|5e-118GAPDH2 [Ipomoea purpurea]660001016 (64)dbj|BAH28852.1|5e-104glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF016G04Sequence577001016 (64)gb|AFD62802.1|2e-102GAPDH2 [Ipomoea purpurea]856001016 (64)dbj|BAH28852.1|5e-149glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF017A03Sequence574001016 (64)gb|AFD62802.1|4e-80GAPDH2 [Ipomoea purpurea]747001016 (64)dbj|BAH28852.1|7e-120glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF018E14Sequence150001016 (64)dbj|BAH28852.1|8e-09glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF022A07Sequence388001016 (64)gb|AFD62802.1|1e-65GAPDH2 [Ipomoea purpurea]676001016 (64)dbj|BAH28852.1|1e-101glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF022M11Sequence573001016 (64)dbj|BAH28852.1|9e-101glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]744001016 (64)dbj|BAH28852.1|1e-120glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF024I07Sequence393001016 (64)gb|AFD62802.1|2e-66GAPDH2 [Ipomoea purpurea]681001016 (64)dbj|BAH28852.1|1e-104glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF025O02Sequence580001016 (64)gb|AFD62802.1|4e-103GAPDH2 [Ipomoea purpurea]748001016 (64)dbj|BAH28852.1|1e-119glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF027C06Sequence505001016 (64)gb|AFD62802.1|3e-82GAPDH2 [Ipomoea purpurea]703001016 (64)dbj|BAH28852.1|2e-109glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF027G08Sequence576001016 (64)gb|AFD62802.1|2e-102GAPDH2 [Ipomoea purpurea]486001016 (64)dbj|BAH28852.1|8e-55glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF035E03Sequence595001016 (64)gb|AFD62802.1|4e-104GAPDH2 [Ipomoea purpurea]684001016 (64)dbj|BAH28852.1|3e-84glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF036C18Sequence578001016 (64)gb|AFD62802.1|2e-102GAPDH2 [Ipomoea purpurea]745001016 (64)dbj|BAH28852.1|7e-120glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF036E04Sequence506001016 (64)gb|AFD62802.1|3e-82GAPDH2 [Ipomoea purpurea]704001016 (64)dbj|BAH28852.1|1e-108glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF036P19Sequence580001016 (64)gb|AFD62802.1|4e-103GAPDH2 [Ipomoea purpurea]615001016 (64)dbj|BAH28852.1|1e-77glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF044I15Sequence641001016 (64)dbj|BAH28852.1|8e-118glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]613001016 (64)dbj|BAH28852.1|6e-68glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF049D21Sequence641001016 (64)gb|AFD62802.1|3e-118GAPDH2 [Ipomoea purpurea]634001016 (64)dbj|BAH28852.1|6e-79glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFF051G18Sequence587001016 (64)gb|AFD62802.1|9e-104GAPDH2 [Ipomoea purpurea]596001016 (64)dbj|BAH28852.1|5e-64glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFN003I18Sequence505001016 (64)gb|AFD62802.1|2e-63GAPDH2 [Ipomoea purpurea]
JMFN009C24Sequence605001016 (64)dbj|BAH28852.1|5e-76glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFS094D07Sequence621001016 (64)gb|AFD62802.1|5e-118GAPDH2 [Ipomoea purpurea]
JMFS103H06Sequence569001016 (64)dbj|BAH28852.1|1e-106glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMFS141D01Sequence613001016 (64)gb|AFD62802.1|5e-118GAPDH2 [Ipomoea purpurea]
JMFS161B01Sequence583001016 (64)gb|AFD62802.1|3e-108GAPDH2 [Ipomoea purpurea]
JMFS163F08Sequence583001016 (64)gb|AFD62802.1|4e-109GAPDH2 [Ipomoea purpurea]
JMSF003J21Sequence317001016 (64)gb|AGH68507.1|2e-50glyceraldehyde-3-phosphate dehydrogenase, partial [Ipomoea batatas]770001016 (64)dbj|BAH28852.1|2e-130glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMSF019M03Sequence511001016 (64)gb|AFD62802.1|4e-83GAPDH2 [Ipomoea purpurea]742001016 (64)dbj|BAH28852.1|2e-130glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMSF030O19Sequence664001016 (64)gb|AFD62802.1|2e-123GAPDH2 [Ipomoea purpurea]714001016 (64)dbj|BAH28852.1|7e-119glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMSF036E05Sequence675001016 (64)ref|XP_006652435.1|6e-87PREDICTED: glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic-like [Oryza br738001016 (64)dbj|BAH28852.1|4e-135glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMSF041P20Sequence681001016 (64)gb|AFD62802.1|2e-127GAPDH2 [Ipomoea purpurea]757001016 (64)dbj|BAH28852.1|5e-138glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMSF045K23Sequence684001016 (64)gb|AFD62802.1|7e-129GAPDH2 [Ipomoea purpurea]712001016 (64)dbj|BAH28852.1|3e-118glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMSF051J10Sequence677001016 (64)gb|AFD62802.1|5e-127GAPDH2 [Ipomoea purpurea]759001016 (64)dbj|BAH28852.1|2e-128glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]
JMSF053O01Sequence675001016 (64)dbj|BAH28852.1|4e-127glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]901001016 (64)dbj|BAH28852.1|5e-154glyceraldehyde-3-phosphate dehydrogenase [Ipomoea nil]

Contig 1016 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001016============================================1391         
   9  ----------------------------------------->JMFF051G18                                                            
                                                              <------------------------------------------rJMFF051G18  
  49 ----------------------------------------->JMFF036P19                                                             
                                                          <------------------------------------------rJMFF036P19  
  49 --------------------------------------------->JMFF049D21                                                         
                                                          <-------------------------------------------rJMFF049D21  
  54  --------------------------------------------->JMFF044I15                                                        
                                                             <----------------------------------------rJMFF044I15  
  60 ------------------------------->JMFF012I19                                                                       
                                               <-----------------------------------------------------rJMFF012I19  
  65 ----------------------------------------->JMFF013K19                                                             
                                                   <-------------------------------------------------rJMFF013K19  
  66 ------------------------------------------>JMFF035E03                                                            
                                                   <------------------------------------------------rJMFF035E03  
  67 ----------------------------------------->JMFF025O02                                                             
                                              <-----------------------------------------------------rJMFF025O02  
  68 --------------------------->JMFF022A07                                                                           
                                                    <------------------------------------------------rJMFF022A07  
  69 ------------------------------------>JMFF027C06                                                                  
                                                  <--------------------------------------------------rJMFF027C06  
  69 ------------------------------------>JMFF036E04                                                                  
                                                  <--------------------------------------------------rJMFF036E04  
  69 ----------------------------------------->JMFF016G04                                                             
                                       <-------------------------------------------------------------rJMFF016G04  
  70 --------------------------->JMFF024I07                                                                           
                                                   <------------------------------------------------rJMFF024I07  
  71  ---------------------------------------->JMFF017A03                                                             
                                               <-----------------------------------------------------rJMFF017A03  
  72 ----------------------------------------->JMFF027G08                                                             
                                                                 <----------------------------------rJMFF027G08  
  74 ----------------------------------------->JMFF036C18                                                             
                                               <----------------------------------------------------rJMFF036C18  
  75  ---------------------------------------->JMFF022M11                                                             
                                              <-----------------------------------------------------rJMFF022M11  
  81 ----------------------------------------->JMFF013J16                                                             
                                               <---------------------------------------------------rJMFF013J16  
  89 ------------------------------------------------>JMSF053O01                                                      
                                  <----------------------------------------------------------------rJMSF053O01  
  99 --------------------------------------------->JMFF015K01                                                         
                                                   <----------------------------------------------rJMFF015K01  
 100 ------------------------------------------------>JMSF051J10                                                      
                                            <-----------------------------------------------------rJMSF051J10  
 101 ------------------------------------------------>JMSF045K23                                                      
                                               <--------------------------------------------------rJMSF045K23  
 104  ----------------------------------------------->JMSF030O19                                                      
                                               <--------------------------------------------------rJMSF030O19  
 108 ------------------------------------>JMSF019M03                                                                  
                                            <----------------------------------------------------rJMSF019M03  
 114  ---------------------->JMSF003J21                                                                               
                                            <-----------------------------------------------------rJMSF003J21  
 140 ------------------------------------------------>JMSF036E05                                                      
                                           <----------------------------------------------------rJMSF036E05  
 140 ------------------------------------------------>JMSF041P20                                                      
                                          <----------------------------------------------------rJMSF041P20

The following clones don't have the opposite end in this pair.

                                                           <------------------------------------------JMFN009C24-     
                                               <----------------------------------------------------rJMFF010C19*      
       ---------------------------------------->JMFS103H06-                                                           
     ---------------------------------------------->JMSF028J03#                                                       
       ------------------------------------------->JMFS141D01-                                                        
       ----------------------------------------->JMFS163F08-                                                          
       ----------------------------------------->JMFS161B01-                                                          
                                                                  <----------rJMFF018E14-                             
       -------------------------------------------->JMFS094D07-                                                       
       -------------------------------->JMFN003I18-