clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF021N07 | Sequence | 565 | 001855 (16) | ref|XP_009617264.1| | 5e-81 | PREDICTED: cyclin-B1-2-like [Nicotiana tomentosiformis] | 523 | 001855 (16) | ref|XP_009617264.1| | 3e-81 | PREDICTED: cyclin-B1-2-like [Nicotiana tomentosiformis] |
JMFF028J06 | Sequence | 532 | 001855 (16) | ref|XP_009617264.1| | 2e-81 | PREDICTED: cyclin-B1-2-like [Nicotiana tomentosiformis] | 623 | 001855 (16) | ref|XP_009617264.1| | 8e-81 | PREDICTED: cyclin-B1-2-like [Nicotiana tomentosiformis] |
JMFF028J17 | Sequence | 417 | 001855 (16) | ref|XP_009617264.1| | 7e-51 | PREDICTED: cyclin-B1-2-like [Nicotiana tomentosiformis] | |||||
JMFF033B15 | Sequence | 534 | 001855 (16) | ref|XP_009617264.1| | 3e-68 | PREDICTED: cyclin-B1-2-like [Nicotiana tomentosiformis] | 585 | 001855 (16) | ref|XP_009617264.1| | 5e-80 | PREDICTED: cyclin-B1-2-like [Nicotiana tomentosiformis] |
JMFF038P11 | Sequence | 577 | 001855 (16) | ref|XP_009617264.1| | 1e-67 | PREDICTED: cyclin-B1-2-like [Nicotiana tomentosiformis] | 526 | 001855 (16) | ref|XP_009784995.1| | 1e-75 | PREDICTED: cyclin-B1-2-like [Nicotiana sylvestris] |
JMFN004B21 | Sequence | 546 | 001855 (16) | ref|XP_009617264.1| | 4e-81 | PREDICTED: cyclin-B1-2-like [Nicotiana tomentosiformis] | |||||
JMFN010E03 | Sequence | 561 | 001855 (16) | ref|XP_009617264.1| | 4e-81 | PREDICTED: cyclin-B1-2-like [Nicotiana tomentosiformis] | |||||
JMFN016I03 | Sequence | 599 | 001855 (16) | ref|XP_009617264.1| | 7e-81 | PREDICTED: cyclin-B1-2-like [Nicotiana tomentosiformis] | |||||
JMFN018I23 | Sequence | 402 | 001855 (16) | ref|XP_006338279.1| | 2e-69 | PREDICTED: cyclin-B1-2-like [Solanum tuberosum] | |||||
JMFN030P16 | Sequence | 599 | 001855 (16) | ref|XP_009617264.1| | 7e-81 | PREDICTED: cyclin-B1-2-like [Nicotiana tomentosiformis] | |||||
JMFN032F06 | Sequence | 524 | 001855 (16) | ref|XP_009617264.1| | 1e-79 | PREDICTED: cyclin-B1-2-like [Nicotiana tomentosiformis] | |||||
JMFN038D19 | Sequence | 576 | 001855 (16) | ref|XP_009617264.1| | 6e-81 | PREDICTED: cyclin-B1-2-like [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001855============================================ 633 8 ------------------------------------------------------------------------------------>JMFF028J06 <--------------------------------------------------------------------------------------------------rJMFF028J06 46 ------------------------------------------------------------------------------------>JMFF033B15 <--------------------------------------------------------------------------------------------rJMFF033B15 107 --------------------------------------------------------------------------------------->JMFF021N07 <----------------------------------------------------------------------------------rJMFF021N07 206 --------------------------------------------------------------->JMFF038P11 <-----------------------------------------------------------------------------------rJMFF038P11
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------------------------------>JMFN038D19- ---------------------------------------------------------------------------------->JMFN032F06- <-----------------------------------------------------------------rJMFF028J17- -------------------------------------------------------------------------------------->JMFN004B21- ---------------------------------------------------------------------------------------------->JMFN016I03- ---------------------------------------------------------------------------------------->JMFN010E03- --------------------------------------------------------------->JMFN018I23- ---------------------------------------------------------------------------------------------->JMFN030P16-