List of clones in pair P016831.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005L02Sequence464004482 (26)emb|CDY42324.1|1e-72BnaC02g09300D [Brassica napus]799004482 (26)gb|AEM97804.1|8e-124Ran3A-1 [Dimocarpus longan] gb|AEM97805.1| Ran3A-2 [Dimocarpus longan] gb|AEM978
JMFF006B23Sequence574004482 (26)emb|CDY06600.1|3e-120BnaC02g13240D [Brassica napus]754004482 (26)gb|EPS73370.1|8e-124hypothetical protein M569_01384, partial [Genlisea aurea]
JMFF009L07Sequence455004482 (26)ref|XP_009595423.1|8e-36PREDICTED: phosphoenolpyruvate carboxylase kinase 1-like [Nicotiana tomentosifo657004482 (26)ref|XP_009621492.1|1e-22PREDICTED: phosphoenolpyruvate carboxylase kinase 1-like [Nicotiana tomentosifo
JMFF020D08Sequence132004482 (26)
JMFF021M16Sequence540004482 (26)emb|CDY06600.1|8e-114BnaC02g13240D [Brassica napus]736004482 (26)gb|AFD93408.1|3e-110Ras-like GTP-binding protein 2, partial [Dimocarpus longan]
JMFF022O17Sequence502004482 (26)emb|CDY42324.1|8e-103BnaC02g09300D [Brassica napus]725004482 (26)gb|AFD93408.1|5e-109Ras-like GTP-binding protein 2, partial [Dimocarpus longan]
JMFF025K08Sequence481004482 (26)gb|AFD93403.1|4e-40Ras-like GTP-binding protein 1 [Dimocarpus longan]439004482 (26)gb|AFD93403.1|8e-41Ras-like GTP-binding protein 1 [Dimocarpus longan]
JMFF030C15Sequence124004482 (26)520004482 (26)gb|AFD93403.1|1e-61Ras-like GTP-binding protein 1 [Dimocarpus longan]
JMFF047B17Sequence633004482 (26)ref|XP_002285307.2|6e-134PREDICTED: GTP-binding nuclear protein Ran-3-like [Vitis vinifera] emb|CBI36254.617004482 (26)gb|AFD93403.1|5e-79Ras-like GTP-binding protein 1 [Dimocarpus longan]
JMFF047B23Sequence630004482 (26)ref|XP_002285307.2|2e-133PREDICTED: GTP-binding nuclear protein Ran-3-like [Vitis vinifera] emb|CBI36254.637004482 (26)gb|AFD93403.1|3e-81Ras-like GTP-binding protein 1 [Dimocarpus longan]
JMFF051F14Sequence445004482 (26)emb|CDY42324.1|4e-88BnaC02g09300D [Brassica napus]207004482 (26)
JMFN037B20Sequence448004482 (26)emb|CDY42324.1|5e-86BnaC02g09300D [Brassica napus]
JMFS013C11Sequence513004482 (26)ref|XP_003603437.1|2e-20GTP-binding nuclear protein Ran-A1 [Medicago truncatula]

Contig 4482 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig004482============================================1519         
 560                              ----------------------------->JMFF051F14                                            
                                                                                      <-----------rJMFF051F14  
 564                              ---------------------------------------->JMFF047B23                                 
                                                         <---------------------------------------rJMFF047B23  
 565                              ----------------------------------------->JMFF047B17                                
                                                         <----------------------------------------rJMFF047B17  
 576                               ----------------------------------->JMFF021M16                                     
                                                  <----------------------------------------------rJMFF021M16  
 577                              ------------------------------------->JMFF006B23                                    
                                              <-------------------------------------------------rJMFF006B23  
 582                              -------------------------------->JMFF022O17                                         
                                                <-----------------------------------------------rJMFF022O17  
 590                              ------->JMFF030C15                                                                  
                                                             <---------------------------------rJMFF030C15  
 632                              ------------------------------>JMFF005L02                                           
                                        <----------------------------------------------------rJMFF005L02  
 881 ----------------------------->JMFF009L07                                                                         
                          <--------------------rJMFF009L07  
1084                                                               ------------------------------>JMFF025K08          
                                                                   <----------------------------rJMFF025K08

The following clones don't have the opposite end in this pair.

                                                                           <-----------------rJMSF004N06#             
                                                                       --------------------------------->JMFS013C11-  
                                               ---------------->JMSF004P08#                                           
                                          <---------------------------------------------------rJMSF051J16*            
                                  ---------------------------->JMFN037B20-                                            
                                                                                           <-----rJMFF020D08-