List of clones in pair P016756.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP006E04Sequence225007127 (50)ref|XP_004514418.1|51.2PREDICTED: uncharacterized protein LOC101494884 [Cicer arietinum]
JMCP018E03Sequence273007127 (50)ref|XP_004514418.1|51.2PREDICTED: uncharacterized protein LOC101494884 [Cicer arietinum]
JMFF001H19Sequence516007127 (50)ref|XP_006298710.1|2e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1240007127 (50)gb|AFW74002.1|5e-26hypothetical protein ZEAMMB73_103592 [Zea mays]
JMFF001I04Sequence515007127 (50)ref|XP_006298710.1|3e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1644007127 (50)ref|XP_006298710.1|1e-93hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1
JMFF017M01Sequence614007127 (50)ref|XP_006298710.1|7e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1570007127 (50)ref|XP_006298710.1|4e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1
JMFF019F19Sequence606007127 (50)ref|XP_006298710.1|6e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1570007127 (50)ref|XP_006298710.1|4e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1
JMFF024P06Sequence471007127 (50)ref|XP_006298710.1|1e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1570007127 (50)ref|XP_006298710.1|4e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1
JMFF025P18Sequence556007127 (50)ref|XP_006298710.1|4e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1571007127 (50)gb|EMT07675.1|8e-7160S ribosomal protein L23 [Aegilops tauschii]
JMFF027F05Sequence497007127 (50)ref|XP_006298710.1|2e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1568007127 (50)ref|XP_006298710.1|4e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1
JMFF028K18Sequence520007127 (50)ref|XP_006298710.1|2e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1569007127 (50)ref|XP_006298710.1|4e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1
JMFF034A20Sequence498007127 (50)ref|XP_006298710.1|2e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1570007127 (50)ref|XP_006298710.1|4e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1
JMFF036C08Sequence632007127 (50)ref|XP_006298710.1|9e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1643007127 (50)ref|XP_006298710.1|1e-93hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1
JMFF036P07Sequence500007127 (50)ref|XP_006298710.1|2e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1659007127 (50)ref|XP_006298710.1|2e-93hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1
JMFF037L14Sequence502007127 (50)ref|XP_006298710.1|2e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1609007127 (50)gb|EMT07675.1|1e-7060S ribosomal protein L23 [Aegilops tauschii]
JMFF044D15Sequence623007127 (50)ref|XP_006298710.1|8e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1653007127 (50)ref|XP_006298710.1|1e-93hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1
JMFF045G12Sequence604007127 (50)ref|XP_006298710.1|6e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1622007127 (50)ref|XP_006298710.1|9e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1
JMFF045N12Sequence604007127 (50)ref|XP_006298710.1|6e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1567007127 (50)ref|NP_001274965.1|1e-89ribosomal protein L17-like protein [Solanum tuberosum] ref|XP_002301852.1| hypot
JMFF046H17Sequence557007127 (50)ref|XP_006298710.1|3e-93hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1400007127 (50)ref|XP_009773907.1|3e-50PREDICTED: 60S ribosomal protein L23-like isoform X3 [Nicotiana sylvestris]
JMFF049M11Sequence471007127 (50)ref|XP_006298710.1|1e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1314007127 (50)emb|CDY49340.1|1e-10BnaA05g33020D [Brassica napus] emb|CDY21127.1| BnaA01g33580D [Brassica napus] em
JMFN003F09Sequence627007127 (50)ref|XP_006298710.1|8e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1
JMFN005H23Sequence597007127 (50)ref|NP_001274965.1|1e-93ribosomal protein L17-like protein [Solanum tuberosum] ref|XP_002301852.1| hypot
JMFN010O20Sequence579007127 (50)ref|NP_001274965.1|7e-94ribosomal protein L17-like protein [Solanum tuberosum] ref|XP_002301852.1| hypot
JMFN011H15Sequence333007127 (50)ref|XP_010091793.1|1e-6160S ribosomal protein L23 [Morus notabilis] gb|EXB46001.1| 60S ribosomal protein
JMFN025N14Sequence604007127 (50)ref|NP_001274965.1|1e-93ribosomal protein L17-like protein [Solanum tuberosum] ref|XP_002301852.1| hypot
JMFN029M16Sequence384007127 (50)ref|XP_009773907.1|3e-59PREDICTED: 60S ribosomal protein L23-like isoform X3 [Nicotiana sylvestris]
JMFN035F08Sequence444007127 (50)ref|XP_009773907.1|2e-60PREDICTED: 60S ribosomal protein L23-like isoform X3 [Nicotiana sylvestris]
JMFN046N01Sequence519007127 (50)gb|EMT07675.1|2e-6960S ribosomal protein L23 [Aegilops tauschii]
JMSF026I16Sequence635007127 (50)ref|XP_006298710.1|1e-93hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1579007127 (50)ref|XP_006298710.1|5e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1
JMSF041O15Sequence616007127 (50)ref|XP_006298710.1|7e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1580007127 (50)ref|NP_001274965.1|3e-92ribosomal protein L17-like protein [Solanum tuberosum] ref|XP_002301852.1| hypot
JMSF042E24Sequence615007127 (50)ref|XP_006298710.1|7e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1576007127 (50)ref|XP_006298710.1|4e-94hypothetical protein CARUB_v10014805mg, partial [Capsella rubella] gb|EOA31608.1

Contig 7127 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig007127============================================ 667         
  22    -------------------------------------------------------------------------->JMFF036P07                         
        <------------------------------------------------------------------------------------------------rJMFF036P07  
  22    ---------------------------------------------------------------------------------------------->JMFF036C08     
        <------------------------------------------------------------------------------------------------rJMFF036C08  
  23    ---------------------------------------------------------------------------->JMFF001I04                       
        <------------------------------------------------------------------------------------------------rJMFF001I04  
  40    -------------------------------------------------------------------------------------------->JMFF044D15       
          <--------------------------------------------------------------------------------------------rJMFF044D15  
  57    --------------------------------------------------------------------------->JMFF037L14                        
        <------------------------------------------------------------------------------------------rJMFF037L14  
  59    ------------------------------------------------------------------------------------------>JMFF045G12         
          <-----------------------------------------------------------------------------------------rJMFF045G12  
  61    ------------------------------------------------------------------------------------------>JMFF045N12         
              <------------------------------------------------------------------------------------rJMFF045N12  
  82    ----------------------------------------------------------------------------------->JMFF046H17                
                                       <--------------------------------------------------------rJMFF046H17  
  92  ---------------------------------------------------------------------------------------------->JMSF026I16       
     <--------------------------------------------------------------------------------------rJMSF026I16  
  94    -------------------------------------------------------------------------------------------->JMSF041O15       
        <-------------------------------------------------------------------------------------rJMSF041O15  
  94    -------------------------------------------------------------------------------------------->JMSF042E24       
        <-------------------------------------------------------------------------------------rJMSF042E24  
  95    ---------------------------------------------------------------------->JMFF024P06                             
        <-------------------------------------------------------------------------------------rJMFF024P06  
  95    -------------------------------------------------------------------------->JMFF034A20                         
        <-------------------------------------------------------------------------------------rJMFF034A20  
  95    ----------------------------------------------------------------------------------->JMFF025P18                
        <-------------------------------------------------------------------------------------rJMFF025P18  
  95    ------------------------------------------------------------------------------------------>JMFF019F19         
        <-------------------------------------------------------------------------------------rJMFF019F19  
  95    ------------------------------------------------------------------------------------------->JMFF017M01        
        <-------------------------------------------------------------------------------------rJMFF017M01  
  96    ----------------------------------------------------------------------------->JMFF028K18                      
        <-------------------------------------------------------------------------------------rJMFF028K18  
  97    -------------------------------------------------------------------------->JMFF027F05                         
        <------------------------------------------------------------------------------------rJMFF027F05  
 173  ---------------------------------------------------------------------------->JMFF001H19                         
                                            <-----------------------------------rJMFF001H19  
 216    ---------------------------------------------------------------------->JMFF049M11                             
                                                              <-------------rJMFF049M11

The following clones don't have the opposite end in this pair.

      ------------------------------------------------->JMFN011H15-                                                   
                                                                  ------------------------------------>JMCP018E03-    
           ------------------------------------------------------------------------------------------>JMFN025N14-     
                                  --------------------------------------------------------->JMFN029M16-               
      --------------------------------------------------------------------------------------------->JMFN003F09-       
            ----------------------------------------------------------------------------------------->JMFN005H23-     
            -------------------------------------------------------------------------------------->JMFN010O20-        
                                 ------------------------------------------------------------------>JMFN035F08-       
                                                                  --------------------------------->rJMCP006E04-      
                           <-----------------------------------------------------------------------JMFN046N01-