clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF003J12 | Sequence | 599 | 010965 (8) | ref|XP_009778082.1| | 8e-51 | PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Nicotiana sylvestris] | 703 | 010965 (8) | ref|XP_011082360.1| | 3e-65 | PREDICTED: 29 kDa ribonucleoprotein, chloroplastic [Sesamum indicum] |
JMSF024J04 | Sequence | 671 | 010965 (8) | ref|XP_009778082.1| | 6e-63 | PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Nicotiana sylvestris] | 758 | 010965 (8) | ref|XP_011082360.1| | 2e-85 | PREDICTED: 29 kDa ribonucleoprotein, chloroplastic [Sesamum indicum] |
JMSF027B01 | Sequence | 665 | 010965 (8) | ref|XP_009778082.1| | 4e-63 | PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Nicotiana sylvestris] | 667 | 010965 (8) | ref|XP_011082360.1| | 5e-74 | PREDICTED: 29 kDa ribonucleoprotein, chloroplastic [Sesamum indicum] |
JMSF044D14 | Sequence | 722 | 010965 (8) | ref|XP_009778082.1| | 2e-74 | PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Nicotiana sylvestris] | 760 | 010965 (8) | ref|XP_011082360.1| | 8e-86 | PREDICTED: 29 kDa ribonucleoprotein, chloroplastic [Sesamum indicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010965============================================1026 11 --------------------------------------------------------->JMFF003J12 <--------------------------------------------------------------------rJMFF003J12 44 ---------------------------------------------------------------->JMSF027B01 <----------------------------------------------------------------rJMSF027B01 67 --------------------------------------------------------------------->JMSF044D14 <-----------------------------------------------------------------------rJMSF044D14 71 ---------------------------------------------------------------->JMSF024J04 <-----------------------------------------------------------------------rJMSF024J04
The following clones don't have the opposite end in this pair.