| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF010N04 | Sequence | 546 | 005196 (18) | gb|AET79382.1| | 7e-57 | spermidine synthase [Populus tomentosa] | 776 | 005196 (18) | ref|XP_002534321.1| | 7e-99 | spermidine synthase 1, putative [Ricinus communis] gb|EEF28057.1| spermidine syn |
| JMFF029I21 | Sequence | 767 | 005196 (18) | ref|XP_002534321.1| | 2e-107 | spermidine synthase 1, putative [Ricinus communis] gb|EEF28057.1| spermidine syn | |||||
| JMFF031I08 | Sequence | 506 | 005196 (18) | gb|AET79382.1| | 1e-59 | spermidine synthase [Populus tomentosa] | 697 | 005196 (18) | ref|XP_008221787.1| | 3e-79 | PREDICTED: spermidine synthase [Prunus mume] |
| JMFF041L17 | Sequence | 656 | 005196 (18) | gb|AET79382.1| | 5e-69 | spermidine synthase [Populus tomentosa] | 640 | 005196 (18) | ref|XP_008221787.1| | 5e-89 | PREDICTED: spermidine synthase [Prunus mume] |
| JMFF044O16 | Sequence | 638 | 005196 (18) | gb|AET79382.1| | 6e-92 | spermidine synthase [Populus tomentosa] | 645 | 005196 (18) | ref|XP_002534321.1| | 6e-63 | spermidine synthase 1, putative [Ricinus communis] gb|EEF28057.1| spermidine syn |
| JMFF047I05 | Sequence | 516 | 005196 (18) | gb|AET79382.1| | 1e-62 | spermidine synthase [Populus tomentosa] | 426 | 005196 (18) | gb|AFH96952.1| | 6e-16 | spermidine synthase [Eleutherococcus senticosus] |
| JMFF049N01 | Sequence | 631 | 005196 (18) | gb|AET79382.1| | 2e-75 | spermidine synthase [Populus tomentosa] | |||||
| JMFN017I16 | Sequence | 624 | 005196 (18) | gb|AET79382.1| | 1e-76 | spermidine synthase [Populus tomentosa] | |||||
| JMFN031H09 | Sequence | 591 | 005196 (18) | gb|AET79382.1| | 5e-51 | spermidine synthase [Populus tomentosa] | |||||
| JMSF023J01 | Sequence | 546 | 005196 (18) | gb|AET79382.1| | 1e-43 | spermidine synthase [Populus tomentosa] | 734 | 005196 (18) | ref|XP_008221787.1| | 8e-120 | PREDICTED: spermidine synthase [Prunus mume] |
| JMSF034P08 | Sequence | 672 | 005196 (18) | gb|AET79382.1| | 6e-33 | spermidine synthase [Populus tomentosa] | 731 | 005196 (18) | ref|XP_002534321.1| | 4e-134 | spermidine synthase 1, putative [Ricinus communis] gb|EEF28057.1| spermidine syn |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig005196============================================1709 211 -------------------------------------->JMSF034P08 <------------------------------------------rJMSF034P08 274 ------------------------------->JMFF010N04 <---------------------------------------------rJMFF010N04 304 ------------------------------------->JMFF041L17 <-------------------------------------rJMFF041L17 309 ------------------------------------>JMFF044O16 <-------------------------------------rJMFF044O16 355 ---------------------------->JMFF031I08 <----------------------------------------rJMFF031I08 361 ----------------------------->JMFF047I05 <------------------------rJMFF047I05 378 ------------------------------->JMSF023J01 <------------------------------------------rJMSF023J01
The following clones don't have the opposite end in this pair.
---------------------------------->JMFN031H09- ------------------------------------>JMFN017I16- <--------------------------------------------rJMFF029I21- ------------------------------------>JMFF049N01-