| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF017D19 | Sequence | 568 | 006626 (14) | ref|XP_009613405.1| | 3e-04 | PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Nicotiana tome | 684 | 006626 (14) | ref|NP_001234707.1| | 5e-09 | dehydration-responsive element binding protein 3 [Solanum lycopersicum] gb|AAO13 |
| JMFF025C10 | Sequence | 621 | 006626 (14) | ref|XP_009613405.1| | 2e-04 | PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Nicotiana tome | 638 | 006626 (14) | ref|XP_009779133.1| | 6e-06 | PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Nicotiana sylv |
| JMFF048F16 | Sequence | 462 | 006626 (14) | 392 | 006626 (14) | ||||||
| JMFF051H05 | Sequence | 644 | 006626 (14) | ref|XP_009613405.1| | 3e-04 | PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Nicotiana tome | 575 | 006626 (14) | ref|XP_009779133.1| | 7e-06 | PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Nicotiana sylv |
| JMFS058D07 | Sequence | 627 | 006626 (14) | ref|XP_009615540.1| | 8e-10 | PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Nicotiana tome | |||||
| JMFS117G09 | Sequence | 602 | 006626 (14) | ref|XP_009613405.1| | 2e-04 | PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Nicotiana tome | |||||
| JMFS145E11 | Sequence | 621 | 006626 (14) | ref|XP_009613405.1| | 3e-04 | PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Nicotiana tome | |||||
| JMFS159H06 | Sequence | 461 | 006626 (14) | emb|CDP01030.1| | 2e-60 | unnamed protein product [Coffea canephora] | |||||
| JMSF037G20 | Sequence | 651 | 006626 (14) | ref|XP_009615540.1| | 1e-04 | PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Nicotiana tome | 650 | 006626 (14) | ref|XP_009615540.1| | 6e-13 | PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Nicotiana tome |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig006626============================================1750 2 ------------------------->JMFF048F16 <---------------------rJMFF048F16 25 ------------------------------------>JMFF051H05 <--------------------------------rJMFF051H05 41 ------------------------------->JMFF017D19 <--------------------------------------rJMFF017D19 41 ---------------------------------->JMFF025C10 <-----------------------------------rJMFF025C10 64 ------------------------------------>JMSF037G20 <------------------------------------rJMSF037G20
The following clones don't have the opposite end in this pair.
------------------------->JMFS159H06- --------------------------------->JMFS117G09- ----------------------------------->JMFS058D07- ---------------------------------->JMFS145E11-