clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF006A20 | Sequence | 490 | 012233 (8) | ref|XP_009793156.1| | 1e-27 | PREDICTED: dnaJ homolog subfamily C member 14 [Nicotiana sylvestris] | 726 | 012233 (8) | ref|XP_009599104.1| | 9e-105 | PREDICTED: dnaJ homolog subfamily C member 14 [Nicotiana tomentosiformis] |
JMSF009P23 | Sequence | 317 | 012233 (8) | ref|XP_006473166.1| | 4e-09 | PREDICTED: uncharacterized J domain-containing protein C17A3.05c-like [Citrus s | 732 | 012233 (8) | ref|XP_009793156.1| | 2e-101 | PREDICTED: dnaJ homolog subfamily C member 14 [Nicotiana sylvestris] |
JMSF021E03 | Sequence | 692 | 012233 (8) | ref|XP_009599104.1| | 2e-75 | PREDICTED: dnaJ homolog subfamily C member 14 [Nicotiana tomentosiformis] | 748 | 012233 (8) | ref|XP_009599104.1| | 4e-105 | PREDICTED: dnaJ homolog subfamily C member 14 [Nicotiana tomentosiformis] |
JMSF023A23 | Sequence | 598 | 012233 (8) | ref|XP_009793156.1| | 2e-55 | PREDICTED: dnaJ homolog subfamily C member 14 [Nicotiana sylvestris] | 518 | 012233 (8) | ref|XP_009599104.1| | 3e-75 | PREDICTED: dnaJ homolog subfamily C member 14 [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012233============================================ 911 1 ----------------------------------------------------->JMFF006A20 <-------------------------------------------------------------------------------rJMFF006A20 50 -------------------------------------------------------------------------->JMSF021E03 <--------------------------------------------------------------------------------rJMSF021E03 99 ---------------------------------->JMSF009P23 <-------------------------------------------------------------------------------rJMSF009P23 99 ---------------------------------------------------------------->JMSF023A23 <-------------------------------------------------------rJMSF023A23
The following clones don't have the opposite end in this pair.