List of clones in pair P016566.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001N16Sequence593004487 (28)ref|XP_009625475.1|2e-109PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]703004487 (28)ref|XP_009625475.1|8e-122PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]
JMFF008L14Sequence349004487 (28)ref|XP_009625475.1|1e-30PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]690004487 (28)ref|XP_009625475.1|7e-118PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]
JMFF010G04Sequence511004487 (28)ref|XP_009783807.1|1e-86PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana sylvestris]
JMFF020J19Sequence219004487 (28)ref|XP_010559184.1|3e-13PREDICTED: 60S ribosomal protein L18-2-like [Tarenaya hassleriana]675004487 (28)ref|XP_009783807.1|2e-97PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana sylvestris]
JMFF023J01Sequence394004487 (28)ref|XP_009625475.1|5e-58PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]644004487 (28)ref|XP_009783807.1|2e-107PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana sylvestris]
JMFF024K14Sequence487004487 (28)ref|XP_009629074.1|2e-60PREDICTED: 60S ribosomal protein L18-2 [Nicotiana tomentosiformis] ref|XP_009788716004487 (28)ref|XP_009783807.1|5e-97PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana sylvestris]
JMFF036E17Sequence561004487 (28)ref|XP_009625475.1|4e-110PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]737004487 (28)ref|XP_009625475.1|7e-122PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]
JMFF040E05Sequence263004487 (28)ref|XP_009625475.1|1e-18PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]717004487 (28)ref|XP_009625475.1|1e-87PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]
JMFF048P04Sequence209004487 (28)ref|XP_002512455.1|4e-2960S ribosomal protein L18, putative [Ricinus communis] gb|EEF49907.1| 60S riboso312004487 (28)ref|XP_008450608.1|1e-13PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo]
JMFN004I04Sequence641004487 (28)ref|XP_009625475.1|3e-120PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]
JMFN009G15Sequence627004487 (28)ref|XP_009629074.1|1e-120PREDICTED: 60S ribosomal protein L18-2 [Nicotiana tomentosiformis] ref|XP_009788
JMFN010D06Sequence603004487 (28)ref|XP_009625475.1|3e-113PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]
JMFN018J20Sequence614004487 (28)ref|XP_009629074.1|2e-119PREDICTED: 60S ribosomal protein L18-2 [Nicotiana tomentosiformis] ref|XP_009788
JMFN029H14Sequence458004487 (28)ref|XP_009783807.1|1e-88PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana sylvestris]
JMFN030C21Sequence659004487 (28)ref|XP_009625475.1|2e-106PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]
JMFN041J01Sequence620004487 (28)ref|XP_009783807.1|5e-116PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana sylvestris]
JMSF031H20Sequence616004487 (28)ref|XP_009625475.1|7e-115PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]691004487 (28)ref|XP_009625475.1|2e-122PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]
JMSF037H03Sequence664004487 (28)ref|XP_009625475.1|1e-122PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]685004487 (28)ref|XP_009625475.1|2e-122PREDICTED: 60S ribosomal protein L18-2-like [Nicotiana tomentosiformis]

Contig 4487 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig004487============================================ 843         
  54       ------------------------>JMFF048P04                                                                        
                                                                    <------------------------------------rJMFF048P04  
  60  ------------------------->JMFF020J19                                                                            
                  <-------------------------------------------------------------------------------rJMFF020J19  
  63 ------------------------------>JMFF040E05                                                                        
             <------------------------------------------------------------------------------------rJMFF040E05  
  65 ----------------------------------------->JMFF008L14                                                             
               <---------------------------------------------------------------------------------rJMFF008L14  
  67  --------------------------------------------------------->JMFF024K14                                            
             <------------------------------------------------------------------------------------rJMFF024K14  
  76 ---------------------------------------------------------------------->JMFF001N16                                
             <-----------------------------------------------------------------------------------rJMFF001N16  
  83 ------------------------------------------------------------------------>JMSF031H20                              
              <---------------------------------------------------------------------------------rJMSF031H20  
 106     ------------------------------------------------------------------------------>JMSF037H03                    
               <---------------------------------------------------------------------------------rJMSF037H03  
 188 ---------------------------------------------->JMFF023J01                                                        
                        <-----------------------------------------------------------rJMFF023J01  
 220     ------------------------------------------------------------------>JMFF036E17                                
            <----------------------------------------------------------------------rJMFF036E17

The following clones don't have the opposite end in this pair.

          ----------------------------------------------------------------------------->JMFN030C21-                   
            ------------------------------------------------------>JMFN029H14-                                        
      ------------------------------------------------------------------------>JMFN041J01-                            
     ------------------------------------------------------------>JMFF010G04-                                         
           --------------------------------------------------------------------------->JMFN004I04-                    
       -------------------------------------------------------------------------->JMFN009G15-                         
       ---------------------------------------------------------------------->JMFN010D06-                             
        ------------------------------------------------------------------------>JMFN018J20-