clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF003K02 | Sequence | 486 | 004111 (12) | gb|KHG17078.1| | 8e-59 | hypothetical protein F383_22720 [Gossypium arboreum] | 788 | 004111 (12) | ref|XP_009594352.1| | 1e-93 | PREDICTED: CMP-sialic acid transporter 5 [Nicotiana tomentosiformis] |
JMFF004A10 | Sequence | 355 | 004111 (12) | gb|KHG17078.1| | 1e-06 | hypothetical protein F383_22720 [Gossypium arboreum] | 797 | 004111 (12) | ref|XP_009594352.1| | 6e-96 | PREDICTED: CMP-sialic acid transporter 5 [Nicotiana tomentosiformis] |
JMFF007P10 | Sequence | 123 | 004111 (12) | 772 | 004111 (12) | ref|XP_009594352.1| | 2e-100 | PREDICTED: CMP-sialic acid transporter 5 [Nicotiana tomentosiformis] | |||
JMFF007P21 | Sequence | 622 | 004111 (12) | gb|KHG17078.1| | 2e-63 | hypothetical protein F383_22720 [Gossypium arboreum] | 765 | 004111 (12) | ref|XP_011097577.1| | 2e-97 | PREDICTED: CMP-sialic acid transporter 5 [Sesamum indicum] |
JMFF037E09 | Sequence | 646 | 004111 (12) | gb|KHG17078.1| | 2e-57 | hypothetical protein F383_22720 [Gossypium arboreum] | 787 | 004111 (12) | ref|XP_009594352.1| | 2e-95 | PREDICTED: CMP-sialic acid transporter 5 [Nicotiana tomentosiformis] |
JMFF044A20 | Sequence | 628 | 004111 (12) | gb|KHG17078.1| | 4e-54 | hypothetical protein F383_22720 [Gossypium arboreum] | 612 | 004111 (12) | ref|XP_002268717.2| | 8e-89 | PREDICTED: CMP-sialic acid transporter 5 [Vitis vinifera] emb|CBI25889.3| unname |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004111============================================1392 17 -------------------------------------------->JMFF044A20 <-------------------------------------------rJMFF044A20 19 ------------------------->JMFF004A10 <-------------------------------------------------------rJMFF004A10 35 --------------------------------------------->JMFF037E09 <------------------------------------------------------rJMFF037E09 35 ------->JMFF007P10 <------------------------------------------------------rJMFF007P10 38 -------------------------------------------->JMFF007P21 <-----------------------------------------------------rJMFF007P21 183 ---------------------------------->JMFF003K02 <------------------------------------------------------rJMFF003K02
The following clones don't have the opposite end in this pair.