clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF024F02 | Sequence | 681 | 003738 (9) | ref|XP_009784300.1| | 3e-111 | PREDICTED: uncharacterized protein LOC104232733 isoform X2 [Nicotiana sylvestri | 774 | 003738 (9) | emb|CDP16692.1| | 5e-90 | unnamed protein product [Coffea canephora] |
JMSF031D07 | Sequence | 674 | 003738 (9) | ref|XP_009784300.1| | 6e-109 | PREDICTED: uncharacterized protein LOC104232733 isoform X2 [Nicotiana sylvestri | 573 | 003738 (9) | emb|CDP16692.1| | 2e-50 | unnamed protein product [Coffea canephora] |
JMSF045G12 | Sequence | 758 | 003738 (9) | ref|XP_009784300.1| | 4e-131 | PREDICTED: uncharacterized protein LOC104232733 isoform X2 [Nicotiana sylvestri | 806 | 003738 (9) | emb|CDP16692.1| | 4e-121 | unnamed protein product [Coffea canephora] |
JMSF049H17 | Sequence | 536 | 003738 (9) | ref|XP_009784300.1| | 3e-83 | PREDICTED: uncharacterized protein LOC104232733 isoform X2 [Nicotiana sylvestri | 391 | 003738 (9) | ref|XP_006356019.1| | 3e-31 | PREDICTED: uncharacterized protein LOC102585296 isoform X1 [Solanum tuberosum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003738============================================1245 1 ----------------------------------------------------->JMSF031D07 <---------------------------------------------rJMSF031D07 7 ------------------------------------------------------>JMSF024F02 <-------------------------------------------------------------rJMSF024F02 21 ------------------------------------------------------------>JMSF045G12 <----------------------------------------------------------------rJMSF045G12 204 ------------------------------------------>JMSF049H17 <------------------------------rJMSF049H17
The following clones don't have the opposite end in this pair.
------------------------->JMSF004P05*