List of clones in pair P016467.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001B14Sequence767000001 (89)ref|XP_003619702.1|1e-121Ubiquitin-like protein [Medicago truncatula]856000001 (89)ref|NP_567286.1|8e-140ubiquitin 11 [Arabidopsis thaliana] ref|NP_849291.1| polyubiquitin 14 [Arabidops
JMFF006F05Sequence738000001 (89)gb|AGV54749.1|3e-136ubiquitin 11 [Phaseolus vulgaris]883000001 (89)ref|XP_009114489.1|2e-160PREDICTED: polyubiquitin-like [Brassica rapa]
JMFF006K07Sequence780000001 (89)gb|AEZ49160.1|1e-147polyubiquitin, partial [Wolffia australiana]861000001 (89)ref|NP_567286.1|7e-151ubiquitin 11 [Arabidopsis thaliana] ref|NP_849291.1| polyubiquitin 14 [Arabidops
JMFF007E15Sequence717000001 (89)ref|XP_003619702.1|2e-93Ubiquitin-like protein [Medicago truncatula]738000001 (89)gb|ACJ85643.1|5e-122unknown [Medicago truncatula]
JMFF010H03Sequence738000001 (89)gb|AGV54749.1|2e-154ubiquitin 11 [Phaseolus vulgaris]907000001 (89)ref|NP_567286.1|8e-151ubiquitin 11 [Arabidopsis thaliana] ref|NP_849291.1| polyubiquitin 14 [Arabidops
JMFF011K08Sequence659000001 (89)gb|AGV54749.1|3e-119ubiquitin 11 [Phaseolus vulgaris]732000001 (89)gb|AAF04147.1|1e-116ubiquitin precursor [Hevea brasiliensis]
JMFF014A15Sequence767000001 (89)emb|CBI22349.3|1e-157unnamed protein product [Vitis vinifera]853000001 (89)ref|NP_567286.1|2e-143ubiquitin 11 [Arabidopsis thaliana] ref|NP_849291.1| polyubiquitin 14 [Arabidops
JMFF015B13Sequence726000001 (89)ref|XP_002872805.1|4e-150hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp. lyrata] gb|EF838000001 (89)gb|ACJ85643.1|7e-130unknown [Medicago truncatula]
JMFF020H04Sequence774000001 (89)gb|AGV54749.1|4e-137ubiquitin 11 [Phaseolus vulgaris]883000001 (89)ref|XP_009114489.1|9e-164PREDICTED: polyubiquitin-like [Brassica rapa]
JMFF024K02Sequence740000001 (89)ref|XP_002872805.1|1e-126hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp. lyrata] gb|EF758000001 (89)ref|NP_567286.1|5e-144ubiquitin 11 [Arabidopsis thaliana] ref|NP_849291.1| polyubiquitin 14 [Arabidops
JMFF025B13Sequence736000001 (89)ref|XP_003619702.1|1e-105Ubiquitin-like protein [Medicago truncatula]908000001 (89)gb|ACJ85643.1|1e-132unknown [Medicago truncatula]
JMFF025L05Sequence783000001 (89)gb|AGV54749.1|2e-137ubiquitin 11 [Phaseolus vulgaris]924000001 (89)ref|XP_009114489.1|1e-161PREDICTED: polyubiquitin-like [Brassica rapa]
JMFF025N15Sequence774000001 (89)gb|AGV54749.1|5e-152ubiquitin 11 [Phaseolus vulgaris]904000001 (89)gb|ABH08755.1|5e-144ubiquitin [Arabidopsis thaliana]
JMFF026F18Sequence754000001 (89)ref|XP_003619702.1|7e-131Ubiquitin-like protein [Medicago truncatula]909000001 (89)ref|XP_009114489.1|2e-158PREDICTED: polyubiquitin-like [Brassica rapa]
JMFF026G17Sequence736000001 (89)gb|AGV54749.1|3e-146ubiquitin 11 [Phaseolus vulgaris]913000001 (89)gb|ABK94002.1|3e-161unknown [Populus trichocarpa]
JMFF026M23Sequence734000001 (89)gb|AGV54749.1|6e-152ubiquitin 11 [Phaseolus vulgaris]915000001 (89)ref|XP_009114489.1|7e-162PREDICTED: polyubiquitin-like [Brassica rapa]
JMFF028D05Sequence720000001 (89)emb|CCO30833.1|3e-122Polyubiquitin [Rhizoctonia solani AG-1 IB]926000001 (89)gb|AFY06654.1|8e-156polyubiquitin, partial [Carica papaya]
JMFF031E01Sequence740000001 (89)gb|AGV54749.1|4e-122ubiquitin 11 [Phaseolus vulgaris]885000001 (89)ref|XP_009114489.1|8e-161PREDICTED: polyubiquitin-like [Brassica rapa]
JMFF032B13Sequence718000001 (89)gb|AGV54749.1|7e-131ubiquitin 11 [Phaseolus vulgaris]825000001 (89)gb|ABH08753.1|5e-131ubiquitin [Arabidopsis thaliana]
JMFF033O01Sequence670000001 (89)gb|ABI84246.1|2e-122polyubiquitin 10 [Arachis hypogaea]852000001 (89)ref|XP_009114489.1|1e-167PREDICTED: polyubiquitin-like [Brassica rapa]
JMFF035L19Sequence741000001 (89)gb|AGV54749.1|2e-140ubiquitin 11 [Phaseolus vulgaris]850000001 (89)gb|ABH08753.1|4e-143ubiquitin [Arabidopsis thaliana]
JMFF038L13Sequence831000001 (89)ref|XP_009114489.1|2e-146PREDICTED: polyubiquitin-like [Brassica rapa]
JMFF039B04Sequence777000001 (89)emb|CCO30833.1|2e-123Polyubiquitin [Rhizoctonia solani AG-1 IB]898000001 (89)gb|ACJ85643.1|4e-135unknown [Medicago truncatula]
JMFF042D23Sequence644000001 (89)gb|AGV54749.1|3e-128ubiquitin 11 [Phaseolus vulgaris]
JMFF045O15Sequence638000001 (89)ref|XP_003619702.1|8e-130Ubiquitin-like protein [Medicago truncatula]581000001 (89)gb|AHI85710.1|2e-104stress-induced protein 5, partial [Capsicum annuum]
JMFF047B19Sequence646000001 (89)gb|AGV54749.1|7e-131ubiquitin 11 [Phaseolus vulgaris]609000001 (89)gb|AHI85710.1|1e-109stress-induced protein 5, partial [Capsicum annuum]
JMFF048F22Sequence398000001 (89)gb|AEG78310.1|4e-67ubiquitin, partial [Cucurbita pepo]355000001 (89)emb|CAD56223.1|7e-49polyubiquitin [Cicer arietinum]
JMFF049D11Sequence634000001 (89)ref|XP_003619702.1|9e-129Ubiquitin-like protein [Medicago truncatula]621000001 (89)gb|AHI85710.1|3e-104stress-induced protein 5, partial [Capsicum annuum]
JMFF051K06Sequence608000001 (89)gb|AGV54749.1|6e-132ubiquitin 11 [Phaseolus vulgaris]577000001 (89)gb|AHI85710.1|1e-103stress-induced protein 5, partial [Capsicum annuum]
JMFN004P23Sequence642000001 (89)gb|AGV54749.1|8e-138ubiquitin 11 [Phaseolus vulgaris]
JMFN008M18Sequence571000001 (89)ref|NP_001190681.1|4e-102ubiquitin 11 [Arabidopsis thaliana] ref|XP_003626480.1| Ubiquitin-like protein [
JMFN010C11Sequence562000001 (89)ref|NP_001190681.1|9e-101ubiquitin 11 [Arabidopsis thaliana] ref|XP_003626480.1| Ubiquitin-like protein [
JMFN011J03Sequence627000001 (89)ref|XP_002872805.1|1e-144hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp. lyrata] gb|EF
JMFN011M16Sequence545000001 (89)ref|NP_001190681.1|2e-96ubiquitin 11 [Arabidopsis thaliana] ref|XP_003626480.1| Ubiquitin-like protein [
JMFN013I13Sequence617000001 (89)gb|AHI85710.1|5e-114stress-induced protein 5, partial [Capsicum annuum]
JMFN014J03Sequence637000001 (89)gb|ABH08753.1|1e-132ubiquitin [Arabidopsis thaliana]
JMFN015N06Sequence606000001 (89)ref|XP_003619702.1|8e-131Ubiquitin-like protein [Medicago truncatula]
JMFN018A18Sequence577000001 (89)gb|AAO43307.1|6e-128putative polyubiquitin [Arabidopsis thaliana]
JMFN019O07Sequence577000001 (89)ref|XP_003619702.1|4e-123Ubiquitin-like protein [Medicago truncatula]
JMFN028F10Sequence379000001 (89)dbj|BAJ61942.1|4e-81ubiquitin [Nymphaea hybrid cultivar]
JMFN029C20Sequence529000001 (89)ref|NP_001190681.1|3e-92ubiquitin 11 [Arabidopsis thaliana] ref|XP_003626480.1| Ubiquitin-like protein [
JMFN029J05Sequence601000001 (89)gb|ABH08753.1|2e-135ubiquitin [Arabidopsis thaliana]
JMFN030J07Sequence592000001 (89)gb|AHI85710.1|1e-108stress-induced protein 5, partial [Capsicum annuum]
JMFN030M18Sequence606000001 (89)ref|XP_003619702.1|1e-127Ubiquitin-like protein [Medicago truncatula]
JMFN031C15Sequence460000001 (89)ref|NP_001190681.1|1e-75ubiquitin 11 [Arabidopsis thaliana] ref|XP_003626480.1| Ubiquitin-like protein [
JMFN031F20Sequence612000001 (89)gb|AGV54749.1|2e-126ubiquitin 11 [Phaseolus vulgaris]
JMFN033D08Sequence499000001 (89)ref|XP_003619702.1|7e-110Ubiquitin-like protein [Medicago truncatula]
JMFN033E22Sequence613000001 (89)ref|XP_003619702.1|9e-131Ubiquitin-like protein [Medicago truncatula]
JMFN035A12Sequence622000001 (89)gb|AAO43307.1|5e-142putative polyubiquitin [Arabidopsis thaliana]
JMFN035H20Sequence245000001 (89)emb|CCI48433.1|1e-44unnamed protein product [Albugo candida]
JMFN035N13Sequence612000001 (89)gb|AHI85710.1|5e-114stress-induced protein 5, partial [Capsicum annuum]
JMFN038B22Sequence514000001 (89)ref|NP_001190681.1|2e-80ubiquitin 11 [Arabidopsis thaliana] ref|XP_003626480.1| Ubiquitin-like protein [
JMFN040C14Sequence622000001 (89)gb|AAO43307.1|8e-142putative polyubiquitin [Arabidopsis thaliana]
JMFN042A11Sequence582000001 (89)ref|XP_003619702.1|2e-130Ubiquitin-like protein [Medicago truncatula]
JMFN043P20Sequence598000001 (89)gb|AGV54749.1|4e-130ubiquitin 11 [Phaseolus vulgaris]
JMFN045C21Sequence600000001 (89)ref|XP_002872805.1|3e-137hypothetical protein ARALYDRAFT_490270 [Arabidopsis lyrata subsp. lyrata] gb|EF
JMFN045N17Sequence630000001 (89)gb|AGV54749.1|1e-132ubiquitin 11 [Phaseolus vulgaris]
JMFN046G10Sequence623000001 (89)gb|AGV54749.1|2e-131ubiquitin 11 [Phaseolus vulgaris]
JMFS034H09Sequence614000001 (89)ref|XP_003619702.1|8e-131Ubiquitin-like protein [Medicago truncatula]
JMFS053B07Sequence586000001 (89)ref|XP_003619702.1|3e-123Ubiquitin-like protein [Medicago truncatula]
JMFS070A12Sequence610000001 (89)ref|XP_003619702.1|2e-127Ubiquitin-like protein [Medicago truncatula]
JMFS158B07Sequence444000001 (89)dbj|BAJ61942.1|4e-87ubiquitin [Nymphaea hybrid cultivar]

Contig 1 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000001============================================1121         
   2 --------------------------------->JMFF048F22                                                                     
                                                                         <-------------------------------rJMFF048F22  
   2 --------------------------------------------------------->JMFF045O15                                             
                                                    <----------------------------------------------------rJMFF045O15  
   6 ---------------------------------------------------------->JMFF047B19                                            
                                                  <------------------------------------------------------rJMFF047B19  
  16 ---------------------------------------------------------------->JMFF025B13                                      
                            <---------------------------------------------------------------------------rJMFF025B13  
  16 ------------------------------------------------------------------->JMFF031E01                                   
                           <----------------------------------------------------------------------------rJMFF031E01  
  16 -------------------------------------------------------------------->JMFF014A15                                  
                                      <-----------------------------------------------------------------rJMFF014A15  
  17 ---------------------------------------------------------------------->JMFF025L05                                
                          <-----------------------------------------------------------------------------rJMFF025L05  
  19 ------------------------------------------------------------------->JMFF026F18                                   
                             <--------------------------------------------------------------------------rJMFF026F18  
  20 ---------------------------------------------------------------->JMFF026G17                                      
                            <--------------------------------------------------------------------------rJMFF026G17  
  20 ----------------------------------------------------------------->JMFF028D05                                     
                           <----------------------------------------------------------------------------rJMFF028D05  
  24 --------------------------------------------------------------->JMFF035L19                                       
                                 <---------------------------------------------------------------------rJMFF035L19  
  24 ------------------------------------------------------------------->JMFF010H03                                   
                              <------------------------------------------------------------------------rJMFF010H03  
  24 --------------------------------------------------------------------->JMFF025N15                                 
                          <----------------------------------------------------------------------------rJMFF025N15  
  24 --------------------------------------------------------------------->JMFF039B04                                 
                                  <--------------------------------------------------------------------rJMFF039B04  
  25 ------------------------------------------------------------------>JMFF015B13                                    
                                    <-------------------------------------------------------------------rJMFF015B13  
  25 ------------------------------------------------------------------>JMFF026M23                                    
                    <----------------------------------------------------------------------------------rJMFF026M23  
  25 ------------------------------------------------------------------->JMFF020H04                                   
                            <--------------------------------------------------------------------------rJMFF020H04  
  26 -------------------------------------------------------->JMFF011K08                                              
                                       <---------------------------------------------------------------rJMFF011K08  
  39 --------------------------------------------------------------->JMFF001B14                                       
                                      <---------------------------------------------------------------rJMFF001B14  
  42     ------------------------------------------------------->JMFF051K06                                           
                                                     <---------------------------------------------------rJMFF051K06  
  43 ------------------------------------------------------------->JMFF032B13                                         
                                    <-----------------------------------------------------------------rJMFF032B13  
  43 ------------------------------------------------------------------->JMFF006F05                                   
                      <-------------------------------------------------------------------------------rJMFF006F05  
  47 ------------------------------------------------------------------->JMFF024K02                                   
                                 <-------------------------------------------------------------------rJMFF024K02  
  69 ------------------------------------------------------>JMFF007E15                                                
                                         <---------------------------------------------------------rJMFF007E15  
  78    --------------------------------------------------------------->JMFF006K07                                    
                               <---------------------------------------------------------------------rJMFF006K07  
 108       ------------------------------------------------------->JMFF033O01                                         
                          <---------------------------------------------------------------------------rJMFF033O01  
 115 --------------------------------------------------------->JMFF049D11                                             
                                                    <------------------------------------------rJMFF049D11

The following clones don't have the opposite end in this pair.

                                                              <--------------------------------JMFN038B22-            
        ------------------------------------------------------>JMFN030M18-                                            
       --------------------------------------->JMFS158B07-                                                            
                                                 ------------------------------------------------------->JMFN013I13-  
                                    -------------------------------------------------------->JMFN011J03-              
                                                 ------------------------------------------------------>JMFN035N13-   
       --------------------------------------------------------->JMFN045N17-                                          
           ---------------------------------->JMFN028F10-                                                             
                                                   ----------------------------------------------------->JMFN030J07-  
                                                               ---------------------------------------->JMFN031C15-   
        ------------------------------------------------------>JMFN015N06-                                            
                                                       <------------------------------------------------JMFN011M16-   
                                          ------------------------------------------------------->JMFN014J03-         
       ---------------------------------------------------------->JMFN004P23-                                         
                                 <----------------------------------------------------------------------rJMFF038L13-  
        ---------------------------------------------------->JMFN019O07-                                              
       ------------------------------------------------------->JMFN033E22-                                            
       -------------------------------------------------------->JMFN046G10-                                           
         ------------------------------------------------------>JMFN043P20-                                           
                             -------------------------------------------------------->JMFN035A12-                     
       ------------------------------------------------------->JMFS034H09-                                            
                               -------------------------------------------------------->JMFN040C14-                   
                               ---------------------------------------------------->JMFN018A18-                       
     ---------------------------------------------------------->JMFF042D23-                                           
          --------------------------------------------->JMFN033D08-                                                   
       ------------------------------------------------------->JMFS070A12-                                            
              ------------------------------------------------------>JMFN045C21-                                      
                                         ------------------------------------------------------>JMFN029J05-           
                                                     --------------------------------------------------->JMFN008M18-  
                                                      -------------------------------------------------->JMFN010C11-  
        ------------------------------------------------------->JMFN031F20-                                           
           <---------------------------------------------------JMFN042A11-                                            
       ----------------------------------------------------->JMFS053B07-                                              
                                                         ----------------------------------------------->JMFN029C20-  
          --------------------->JMFN035H20-