clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF004D14 | Sequence | 510 | 001722 (13) | ref|NP_001275389.1| | 9e-55 | ubiquitin-conjugating enzyme E2 27-like [Solanum tuberosum] gb|ABB86282.1| ubiqu | 170 | 001722 (13) | |||
JMFF016K23 | Sequence | 582 | 001722 (13) | ref|XP_011073121.1| | 6e-98 | PREDICTED: ubiquitin-conjugating enzyme E2 27 isoform X2 [Sesamum indicum] | 793 | 001722 (13) | ref|NP_001275389.1| | 1e-118 | ubiquitin-conjugating enzyme E2 27-like [Solanum tuberosum] gb|ABB86282.1| ubiqu |
JMFF021K04 | Sequence | 541 | 001722 (13) | ref|NP_001275389.1| | 2e-74 | ubiquitin-conjugating enzyme E2 27-like [Solanum tuberosum] gb|ABB86282.1| ubiqu | 697 | 001722 (13) | ref|NP_001275389.1| | 3e-120 | ubiquitin-conjugating enzyme E2 27-like [Solanum tuberosum] gb|ABB86282.1| ubiqu |
JMFF030H15 | Sequence | 365 | 001722 (13) | ref|NP_001275389.1| | 9e-29 | ubiquitin-conjugating enzyme E2 27-like [Solanum tuberosum] gb|ABB86282.1| ubiqu | |||||
JMFF033N18 | Sequence | 529 | 001722 (13) | ref|NP_001275389.1| | 1e-44 | ubiquitin-conjugating enzyme E2 27-like [Solanum tuberosum] gb|ABB86282.1| ubiqu | 504 | 001722 (13) | ref|XP_008464378.1| | 2e-77 | PREDICTED: ubiquitin-conjugating enzyme E2 27 [Cucumis melo] |
JMFF042L15 | Sequence | 636 | 001722 (13) | ref|NP_001233964.1| | 6e-84 | ubiquitin conjugating enzyme [Solanum lycopersicum] emb|CAA58111.1| ubiquitin co | 518 | 001722 (13) | |||
JMSF047K19 | Sequence | 698 | 001722 (13) | ref|NP_001275389.1| | 9e-119 | ubiquitin-conjugating enzyme E2 27-like [Solanum tuberosum] gb|ABB86282.1| ubiqu | 775 | 001722 (13) | ref|NP_001275389.1| | 7e-120 | ubiquitin-conjugating enzyme E2 27-like [Solanum tuberosum] gb|ABB86282.1| ubiqu |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001722============================================1401 59 -------------------------------------------->JMFF042L15 <------------------------------------rJMFF042L15 103 ----------------------------------->JMFF004D14 <----------rJMFF004D14 439 ------------------------------------->JMFF033N18 <-----------------------------------rJMFF033N18 547 -------------------------------------->JMFF021K04 <-------------------------------------------------rJMFF021K04 619 ---------------------------------------->JMFF016K23 <-------------------------------------------------------rJMFF016K23 630 ------------------------------------------------->JMSF047K19 <------------------------------------------------------rJMSF047K19
The following clones don't have the opposite end in this pair.
------------------------->JMFF030H15-