clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF011J14 | Sequence | 560 | 001632 (11) | ref|XP_004247169.1| | 3e-52 | PREDICTED: pre-mRNA-splicing factor 18 [Solanum lycopersicum] | 681 | 001632 (11) | ref|XP_006444054.1| | 2e-108 | hypothetical protein CICLE_v10020348mg [Citrus clementina] ref|XP_006479709.1| P |
JMFF015K12 | Sequence | 569 | 001632 (11) | ref|XP_004247169.1| | 4e-48 | PREDICTED: pre-mRNA-splicing factor 18 [Solanum lycopersicum] | 549 | 001632 (11) | gb|KHN02574.1| | 5e-91 | Pre-mRNA-splicing factor 18 [Glycine soja] |
JMFF038F17 | Sequence | 589 | 001632 (11) | ref|XP_004247169.1| | 4e-52 | PREDICTED: pre-mRNA-splicing factor 18 [Solanum lycopersicum] | 770 | 001632 (11) | ref|XP_009623944.1| | 1e-125 | PREDICTED: pre-mRNA-splicing factor 18 [Nicotiana tomentosiformis] |
JMFS106F04 | Sequence | 627 | 001632 (11) | ref|XP_004247169.1| | 3e-61 | PREDICTED: pre-mRNA-splicing factor 18 [Solanum lycopersicum] | |||||
JMSF022C23 | Sequence | 678 | 001632 (11) | ref|XP_004247169.1| | 2e-60 | PREDICTED: pre-mRNA-splicing factor 18 [Solanum lycopersicum] | 803 | 001632 (11) | ref|XP_006444054.1| | 2e-114 | hypothetical protein CICLE_v10020348mg [Citrus clementina] ref|XP_006479709.1| P |
JMSF029D01 | Sequence | 625 | 001632 (11) | ref|XP_004247169.1| | 9e-61 | PREDICTED: pre-mRNA-splicing factor 18 [Solanum lycopersicum] | 732 | 001632 (11) | ref|XP_006444054.1| | 6e-115 | hypothetical protein CICLE_v10020348mg [Citrus clementina] ref|XP_006479709.1| P |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001632============================================1513 32 -------------------------------------------->JMSF022C23 <----------------------------------------------------rJMSF022C23 75 ------------------------------------>JMFF011J14 <-------------------------------------------rJMFF011J14 91 ------------------------------------->JMFF015K12 <-----------------------------------rJMFF015K12 98 ------------------------------------->JMFF038F17 <--------------------------------------------------rJMFF038F17 106 ---------------------------------------->JMSF029D01 <-----------------------------------------------rJMSF029D01
The following clones don't have the opposite end in this pair.
---------------------------------------->JMFS106F04-