List of clones in pair P016417.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012E19Sequence463000185 (18)ref|XP_010090123.1|7e-7840S ribosomal protein S3-3 [Morus notabilis] gb|EXB38920.1| 40S ribosomal protei758000185 (18)ref|XP_006342357.1|3e-138PREDICTED: 40S ribosomal protein S3-2-like [Solanum tuberosum]
JMFF017H06Sequence534000185 (18)ref|XP_010090123.1|8e-10140S ribosomal protein S3-3 [Morus notabilis] gb|EXB38920.1| 40S ribosomal protei812000185 (18)ref|XP_009777049.1|2e-142PREDICTED: 40S ribosomal protein S3-2-like [Nicotiana sylvestris]
JMFF019N18Sequence528000185 (18)ref|XP_010090123.1|2e-9940S ribosomal protein S3-3 [Morus notabilis] gb|EXB38920.1| 40S ribosomal protei747000185 (18)ref|XP_009777049.1|6e-76PREDICTED: 40S ribosomal protein S3-2-like [Nicotiana sylvestris]
JMFF032M16Sequence557000185 (18)ref|XP_010090123.1|1e-10140S ribosomal protein S3-3 [Morus notabilis] gb|EXB38920.1| 40S ribosomal protei795000185 (18)ref|XP_009777049.1|1e-148PREDICTED: 40S ribosomal protein S3-2-like [Nicotiana sylvestris]
JMFN019B15Sequence640000185 (18)ref|XP_010090123.1|1e-13140S ribosomal protein S3-3 [Morus notabilis] gb|EXB38920.1| 40S ribosomal protei
JMFN029G10Sequence618000185 (18)ref|XP_010090123.1|2e-12640S ribosomal protein S3-3 [Morus notabilis] gb|EXB38920.1| 40S ribosomal protei
JMFN038J17Sequence609000185 (18)ref|XP_010090123.1|1e-12340S ribosomal protein S3-3 [Morus notabilis] gb|EXB38920.1| 40S ribosomal protei
JMFN046B06Sequence567000185 (18)ref|XP_010090123.1|2e-11040S ribosomal protein S3-3 [Morus notabilis] gb|EXB38920.1| 40S ribosomal protei
JMSF025I14Sequence662000185 (18)ref|XP_010090123.1|2e-13440S ribosomal protein S3-3 [Morus notabilis] gb|EXB38920.1| 40S ribosomal protei784000185 (18)ref|XP_009777049.1|8e-139PREDICTED: 40S ribosomal protein S3-2-like [Nicotiana sylvestris]
JMSF034A09Sequence646000185 (18)ref|XP_010090123.1|1e-12440S ribosomal protein S3-3 [Morus notabilis] gb|EXB38920.1| 40S ribosomal protei727000185 (18)ref|XP_006342357.1|4e-139PREDICTED: 40S ribosomal protein S3-2-like [Solanum tuberosum]
JMSF035E24Sequence695000185 (18)ref|XP_008220558.1|1e-141PREDICTED: 40S ribosomal protein S3-2 [Prunus mume]

Contig 185 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000185============================================1066         
  20   ------------------------------------------------->JMFF019N18                                                   
                                    <--------------------------------------------------------------------rJMFF019N18  
 131   ------------------------------------------------->JMFF017H06                                                   
                    <--------------------------------------------------------------------------rJMFF017H06  
 136 --------------------------------------------------->JMFF032M16                                                   
                  <--------------------------------------------------------------------------rJMFF032M16  
 138 ------------------------------------------>JMFF012E19                                                            
                     <----------------------------------------------------------------------rJMFF012E19  
 173 ------------------------------------------------------------>JMSF034A09                                          
                     <-------------------------------------------------------------------rJMSF034A09  
 284   ------------------------------------------------------------->JMSF025I14                                       
                     <----------------------------------------------------------rJMSF025I14

The following clones don't have the opposite end in this pair.

        --------------------------------------------------->JMFN046B06-                                               
       ---------------------------------------------------------------->JMSF035E24-                                   
        -------------------------------------------------------->JMFN038J17-                                          
       ---------------------------------------------------------->JMSF028D05*                                         
        --------------------------------------------------------->JMFN029G10-                                         
        ----------------------------------------------------------->JMFN019B15-