| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF017H17 | Sequence | 596 | 001785 (22) | ref|XP_009605819.1| | 2e-64 | PREDICTED: lanC-like protein GCL1 [Nicotiana tomentosiformis] | 409 | 001785 (22) | emb|CDP01505.1| | 6e-78 | unnamed protein product [Coffea canephora] |
| JMFF028M04 | Sequence | 526 | 001785 (22) | ref|XP_009605819.1| | 1e-59 | PREDICTED: lanC-like protein GCL1 [Nicotiana tomentosiformis] | |||||
| JMFF041G21 | Sequence | 633 | 001785 (22) | ref|XP_009605819.1| | 3e-87 | PREDICTED: lanC-like protein GCL1 [Nicotiana tomentosiformis] | 563 | 001785 (22) | ref|XP_011022825.1| | 8e-82 | PREDICTED: lanC-like protein GCL1 [Populus euphratica] |
| JMFF041P15 | Sequence | 649 | 001785 (22) | ref|XP_009605819.1| | 2e-89 | PREDICTED: lanC-like protein GCL1 [Nicotiana tomentosiformis] | 631 | 001785 (22) | ref|XP_011022825.1| | 3e-87 | PREDICTED: lanC-like protein GCL1 [Populus euphratica] |
| JMFF043E12 | Sequence | 634 | 001785 (22) | ref|XP_009605819.1| | 4e-86 | PREDICTED: lanC-like protein GCL1 [Nicotiana tomentosiformis] | 610 | 001785 (22) | ref|XP_011022825.1| | 5e-84 | PREDICTED: lanC-like protein GCL1 [Populus euphratica] |
| JMFF044O07 | Sequence | 632 | 001785 (22) | ref|XP_009605819.1| | 8e-86 | PREDICTED: lanC-like protein GCL1 [Nicotiana tomentosiformis] | 646 | 001785 (22) | ref|XP_011022825.1| | 2e-40 | PREDICTED: lanC-like protein GCL1 [Populus euphratica] |
| JMFF047N08 | Sequence | 636 | 001785 (22) | ref|XP_009605819.1| | 2e-86 | PREDICTED: lanC-like protein GCL1 [Nicotiana tomentosiformis] | 509 | 001785 (22) | ref|XP_011022825.1| | 8e-61 | PREDICTED: lanC-like protein GCL1 [Populus euphratica] |
| JMFF050A06 | Sequence | 595 | 001785 (22) | ref|XP_009605819.1| | 2e-77 | PREDICTED: lanC-like protein GCL1 [Nicotiana tomentosiformis] | 625 | 001785 (22) | ref|XP_011022825.1| | 1e-72 | PREDICTED: lanC-like protein GCL1 [Populus euphratica] |
| JMFS124D08 | Sequence | 569 | 001785 (22) | ref|XP_009605819.1| | 7e-78 | PREDICTED: lanC-like protein GCL1 [Nicotiana tomentosiformis] | |||||
| JMSF028K10 | Sequence | 637 | 001785 (22) | ref|XP_009605819.1| | 5e-88 | PREDICTED: lanC-like protein GCL1 [Nicotiana tomentosiformis] | |||||
| JMSF034B13 | Sequence | 626 | 001785 (22) | emb|CDP01505.1| | 1e-101 | unnamed protein product [Coffea canephora] | 758 | 001785 (22) | ref|XP_011022825.1| | 3e-121 | PREDICTED: lanC-like protein GCL1 [Populus euphratica] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig001785============================================1692 7 ------------------------------------>JMFF044O07 <-------------------------------------rJMFF044O07 200 ---------------------------------->JMFF050A06 <---------------------------------rJMFF050A06 212 ------------------------------------->JMFF041P15 <------------------------------------rJMFF041P15 216 ------------------------------------>JMFF047N08 <-----------------------------rJMFF047N08 219 ------------------------------------>JMFF043E12 <-----------------------------------rJMFF043E12 265 ------------------------------------>JMFF041G21 <--------------------------------rJMFF041G21 639 ---------------------------------->JMFF017H17 <-----------------------rJMFF017H17 763 ----------------------------->JMSF034B13 <--------------------------------------------rJMSF034B13
The following clones don't have the opposite end in this pair.
-------------------------------->JMFF028O23* --------------------------->rJMSF036J18# --------------------------------->JMFS124D08- ------------------------------>JMFF028M04- ------------------------------------>JMSF028K10- ------------------------------->JMFF038P07*