clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF002G14 | Sequence | 564 | 009444 (23) | gb|AAL49749.1|AF452011_1 | 9e-101 | aquaporin-like protein [Petunia x hybrida] | 748 | 009444 (23) | gb|AAO12275.1| | 2e-67 | plasma membrane MIP protein [Axonopus compressus] |
JMFF012L04 | Sequence | 521 | 009444 (23) | gb|AAL49749.1|AF452011_1 | 2e-97 | aquaporin-like protein [Petunia x hybrida] | 751 | 009444 (23) | emb|CBI25512.3| | 5e-70 | unnamed protein product [Vitis vinifera] |
JMFF013A04 | Sequence | 750 | 009444 (23) | gb|AAW55293.1| | 2e-69 | aquaporin 1 [Aegiceras corniculatum] | |||||
JMFF019D01 | Sequence | 520 | 009444 (23) | gb|AAL49749.1|AF452011_1 | 2e-97 | aquaporin-like protein [Petunia x hybrida] | 722 | 009444 (23) | emb|CBI25512.3| | 2e-62 | unnamed protein product [Vitis vinifera] |
JMFF020H10 | Sequence | 552 | 009444 (23) | gb|AAL49749.1|AF452011_1 | 2e-102 | aquaporin-like protein [Petunia x hybrida] | 485 | 009444 (23) | |||
JMFF025K06 | Sequence | 529 | 009444 (23) | gb|AAL49749.1|AF452011_1 | 5e-99 | aquaporin-like protein [Petunia x hybrida] | 752 | 009444 (23) | gb|AAW55293.1| | 3e-69 | aquaporin 1 [Aegiceras corniculatum] |
JMFF034F23 | Sequence | 440 | 009444 (23) | gb|AAL49749.1|AF452011_1 | 3e-76 | aquaporin-like protein [Petunia x hybrida] | 615 | 009444 (23) | ref|XP_004173309.1| | 5e-36 | PREDICTED: probable aquaporin PIP1-5-like, partial [Cucumis sativus] |
JMFF042D02 | Sequence | 641 | 009444 (23) | gb|AAL49749.1|AF452011_1 | 4e-124 | aquaporin-like protein [Petunia x hybrida] | 563 | 009444 (23) | gb|ABC01892.1| | 2e-19 | major intrinsic protein 1-like protein [Solanum tuberosum] |
JMFF046L09 | Sequence | 528 | 009444 (23) | gb|AAL49749.1|AF452011_1 | 3e-98 | aquaporin-like protein [Petunia x hybrida] | |||||
JMFS072C12 | Sequence | 625 | 009444 (23) | gb|AAL49749.1|AF452011_1 | 3e-124 | aquaporin-like protein [Petunia x hybrida] | |||||
JMSF034K04 | Sequence | 668 | 009444 (23) | gb|AAL49749.1|AF452011_1 | 7e-121 | aquaporin-like protein [Petunia x hybrida] | 671 | 009444 (23) | gb|AAW55293.1| | 2e-56 | aquaporin 1 [Aegiceras corniculatum] |
JMSF041N19 | Sequence | 773 | 009444 (23) | gb|AAL49749.1|AF452011_1 | 3e-155 | aquaporin-like protein [Petunia x hybrida] | 631 | 009444 (23) | emb|CBI25512.3| | 1e-49 | unnamed protein product [Vitis vinifera] |
JMSF041O19 | Sequence | 746 | 009444 (23) | gb|AAL49749.1|AF452011_1 | 3e-149 | aquaporin-like protein [Petunia x hybrida] | 732 | 009444 (23) | gb|AAW55293.1| | 6e-70 | aquaporin 1 [Aegiceras corniculatum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009444============================================1354 2 ---------------------------------------------->JMFF042D02 <-----------------------------------------rJMFF042D02 22 -------------------------------------->JMFF025K06 <------------------------------------------------------rJMFF025K06 22 ---------------------------------------->JMFF020H10 <-----------------------------------rJMFF020H10 22 ----------------------------------------->JMFF002G14 <------------------------------------------------------rJMFF002G14 26 ------------------------------------->JMFF012L04 <------------------------------------------------------rJMFF012L04 27 ------------------------------->JMFF034F23 <--------------------------------------------rJMFF034F23 27 ------------------------------------->JMFF019D01 <----------------------------------------------------rJMFF019D01 52 ------------------------------------------------>JMSF034K04 <------------------------------------------------rJMSF034K04 53 ------------------------------------------------------>JMSF041O19 <-----------------------------------------------------rJMSF041O19 59 -------------------------------------------------------->JMSF041N19 <----------------------------------------------rJMSF041N19
The following clones don't have the opposite end in this pair.
<------------------------------------------------------rJMFF013A04- --------------------------------------------->JMFS072C12- -------------------------------------->JMFF046L09-