clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF008N19 | Sequence | 504 | 008882 (11) | ref|XP_004242001.1| | 6e-58 | PREDICTED: peroxisome biogenesis protein 19-2 [Solanum lycopersicum] | 148 | 008882 (11) | |||
JMFF026H03 | Sequence | 610 | 008882 (11) | ref|XP_004242001.1| | 1e-84 | PREDICTED: peroxisome biogenesis protein 19-2 [Solanum lycopersicum] | 808 | 008882 (11) | ref|XP_009605553.1| | 4e-92 | PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana tomentosiformis] |
JMFF027N24 | Sequence | 497 | 008882 (11) | ref|XP_004242001.1| | 1e-57 | PREDICTED: peroxisome biogenesis protein 19-2 [Solanum lycopersicum] | 784 | 008882 (11) | ref|XP_009605553.1| | 2e-86 | PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana tomentosiformis] |
JMFF047L18 | Sequence | 627 | 008882 (11) | ref|XP_004242001.1| | 2e-85 | PREDICTED: peroxisome biogenesis protein 19-2 [Solanum lycopersicum] | 475 | 008882 (11) | ref|XP_009768017.1| | 2e-24 | PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana sylvestris] |
JMFS015C05 | Sequence | 571 | 008882 (11) | ref|XP_004242001.1| | 5e-84 | PREDICTED: peroxisome biogenesis protein 19-2 [Solanum lycopersicum] | |||||
JMSF026G01 | Sequence | 690 | 008882 (11) | ref|XP_004242001.1| | 1e-107 | PREDICTED: peroxisome biogenesis protein 19-2 [Solanum lycopersicum] | 775 | 008882 (11) | ref|XP_009605553.1| | 7e-92 | PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008882============================================1116 3 ------------------------------------------------------>JMFF026H03 <-----------------------------------------------------------------------rJMFF026H03 16 ------------------------------------------------------->JMFF047L18 <----------------------------------------rJMFF047L18 18 -------------------------------------------->JMFF027N24 <--------------------------------------------------------------------rJMFF027N24 50 -------------------------------------------->JMFF008N19 <------------rJMFF008N19 114 ------------------------------------------------------------>JMSF026G01 <-------------------------------------------------------------------rJMSF026G01
The following clones don't have the opposite end in this pair.
-------------------------------------------------->JMFS015C05-