clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF010I04 | Sequence | 563 | 008170 (14) | ref|XP_009625012.1| | 1e-82 | PREDICTED: malate dehydrogenase, glyoxysomal-like [Nicotiana tomentosiformis] | 811 | 008170 (14) | ref|XP_009790667.1| | 2e-78 | PREDICTED: malate dehydrogenase, glyoxysomal-like [Nicotiana sylvestris] |
JMFF013P09 | Sequence | 525 | 008170 (14) | ref|XP_009625012.1| | 1e-70 | PREDICTED: malate dehydrogenase, glyoxysomal-like [Nicotiana tomentosiformis] | 768 | 008170 (14) | ref|XP_009790667.1| | 2e-80 | PREDICTED: malate dehydrogenase, glyoxysomal-like [Nicotiana sylvestris] |
JMFF016O16 | Sequence | 539 | 008170 (14) | ref|XP_009790667.1| | 6e-114 | PREDICTED: malate dehydrogenase, glyoxysomal-like [Nicotiana sylvestris] | 801 | 008170 (14) | ref|XP_009790667.1| | 6e-101 | PREDICTED: malate dehydrogenase, glyoxysomal-like [Nicotiana sylvestris] |
JMFF026L07 | Sequence | 542 | 008170 (14) | ref|XP_009625012.1| | 1e-70 | PREDICTED: malate dehydrogenase, glyoxysomal-like [Nicotiana tomentosiformis] | 788 | 008170 (14) | ref|XP_009790667.1| | 1e-75 | PREDICTED: malate dehydrogenase, glyoxysomal-like [Nicotiana sylvestris] |
JMFF032I20 | Sequence | 166 | 008170 (14) | ||||||||
JMFF037P23 | Sequence | 545 | 008170 (14) | gb|KHG09742.1| | 3e-76 | Malate dehydrogenase-2C glyoxysomal [Gossypium arboreum] | 672 | 008170 (14) | ref|XP_009790667.1| | 1e-90 | PREDICTED: malate dehydrogenase, glyoxysomal-like [Nicotiana sylvestris] |
JMFF040P14 | Sequence | 469 | 008170 (14) | ref|XP_009625012.1| | 5e-50 | PREDICTED: malate dehydrogenase, glyoxysomal-like [Nicotiana tomentosiformis] | 779 | 008170 (14) | ref|XP_009790667.1| | 5e-78 | PREDICTED: malate dehydrogenase, glyoxysomal-like [Nicotiana sylvestris] |
JMSF040F19 | Sequence | 780 | 008170 (14) | ref|XP_009790667.1| | 1e-169 | PREDICTED: malate dehydrogenase, glyoxysomal-like [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008170============================================1484 4 ------------------------------------>JMFF026L07 <----------------------------------------------------rJMFF026L07 28 ------------------------------------->JMFF010I04 <------------------------------------------------------rJMFF010I04 47 ------------------------------>JMFF040P14 <---------------------------------------------------rJMFF040P14 99 ---------------------------------->JMFF013P09 <--------------------------------------------------rJMFF013P09 99 ------------------------------------>JMFF037P23 <--------------------------------------------rJMFF037P23 541 ----------------------------------->JMFF016O16 <-----------------------------------------------------rJMFF016O16
The following clones don't have the opposite end in this pair.
<---------------------------------------------------rJMSF040F19- <----------rJMFF032I20-