clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF007L19 | Sequence | 276 | 013959 (16) | 746 | 013959 (16) | gb|ADU60362.1| | 2e-84 | glutamyl-tRNA reductase binding protein [Nicotiana tabacum] | |||
JMSF018G05 | Sequence | 600 | 013959 (16) | ref|XP_009758668.1| | 167 | PREDICTED: uncharacterized protein LOC104211321 [Nicotiana sylvestris] gb|ADU603 | 763 | 013959 (16) | gb|ADU60362.1| | 3e-70 | glutamyl-tRNA reductase binding protein [Nicotiana tabacum] |
JMSF020J21 | Sequence | 652 | 013959 (16) | ref|XP_009758668.1| | 180 | PREDICTED: uncharacterized protein LOC104211321 [Nicotiana sylvestris] gb|ADU603 | 760 | 013959 (16) | gb|ADU60362.1| | 1e-87 | glutamyl-tRNA reductase binding protein [Nicotiana tabacum] |
JMSF021J22 | Sequence | 600 | 013959 (16) | ref|XP_009758668.1| | 156 | PREDICTED: uncharacterized protein LOC104211321 [Nicotiana sylvestris] gb|ADU603 | |||||
JMSF023C11 | Sequence | 620 | 013959 (16) | ref|XP_009758668.1| | 156 | PREDICTED: uncharacterized protein LOC104211321 [Nicotiana sylvestris] gb|ADU603 | 760 | 013959 (16) | gb|ADU60362.1| | 8e-90 | glutamyl-tRNA reductase binding protein [Nicotiana tabacum] |
JMSF026E03 | Sequence | 759 | 013959 (16) | ref|XP_009758668.1| | 303 | PREDICTED: uncharacterized protein LOC104211321 [Nicotiana sylvestris] gb|ADU603 | |||||
JMSF027F10 | Sequence | 622 | 013959 (16) | ref|XP_009758668.1| | 340 | PREDICTED: uncharacterized protein LOC104211321 [Nicotiana sylvestris] gb|ADU603 | 750 | 013959 (16) | gb|ADU60362.1| | 1e-86 | glutamyl-tRNA reductase binding protein [Nicotiana tabacum] |
JMSF037I17 | Sequence | 692 | 013959 (16) | ref|XP_009758668.1| | 196 | PREDICTED: uncharacterized protein LOC104211321 [Nicotiana sylvestris] gb|ADU603 | 725 | 013959 (16) | gb|ADU60362.1| | 9e-88 | glutamyl-tRNA reductase binding protein [Nicotiana tabacum] |
JMSF048C18 | Sequence | 662 | 013959 (16) | ref|XP_009758668.1| | 202 | PREDICTED: uncharacterized protein LOC104211321 [Nicotiana sylvestris] gb|ADU603 | 759 | 013959 (16) | gb|ADU60362.1| | 5e-89 | glutamyl-tRNA reductase binding protein [Nicotiana tabacum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig013959============================================1406 15 ------------------------------------------->JMSF023C11 <-----------------------------------------------------rJMSF023C11 23 --------------------------------------------->JMSF020J21 <-----------------------------------------------------rJMSF020J21 68 ------------------------------------------>JMSF018G05 <-----------------------------------------------------rJMSF018G05 69 ------------------>JMSF007L19 <---------------------------------------------------rJMSF007L19 69 ------------------------------------------------>JMSF037I17 <--------------------------------------------------rJMSF037I17 78 ---------------------------------------------->JMSF048C18 <-----------------------------------------------------rJMSF048C18 521 ------------------------------------------->JMSF027F10 <----------------------------------------------------rJMSF027F10
The following clones don't have the opposite end in this pair.
----------------------------------------->JMSF021J22- <-----------------------------------------------------rJMSF026E03-