clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF007A10 | Sequence | 206 | 008617 (9) | ref|XP_009786978.1| | 1e-21 | PREDICTED: ABC transporter I family member 10, chloroplastic-like isoform X2 [N | 759 | 008617 (9) | ref|XP_009587197.1| | 3e-124 | PREDICTED: ABC transporter I family member 10, chloroplastic [Nicotiana tomento |
JMSF013E07 | Sequence | 326 | 008617 (9) | ref|XP_009786978.1| | 7e-31 | PREDICTED: ABC transporter I family member 10, chloroplastic-like isoform X2 [N | 747 | 008617 (9) | ref|XP_006340151.1| | 2e-122 | PREDICTED: ABC transporter I family member 10, chloroplastic-like [Solanum tube |
JMSF041B10 | Sequence | 760 | 008617 (9) | ref|XP_009786977.1| | 2e-115 | PREDICTED: ABC transporter I family member 10, chloroplastic-like isoform X1 [N | 729 | 008617 (9) | ref|XP_002280615.1| | 4e-89 | PREDICTED: ABC transporter I family member 10, chloroplastic [Vitis vinifera] |
JMSF049G14 | Sequence | 678 | 008617 (9) | ref|XP_009786978.1| | 6e-97 | PREDICTED: ABC transporter I family member 10, chloroplastic-like isoform X2 [N | 763 | 008617 (9) | ref|XP_004251120.1| | 3e-124 | PREDICTED: ABC transporter I family member 10, chloroplastic isoform X2 [Solanu |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008617============================================1045 8 ------------------------------------------------------------------------>JMSF041B10 <----------------------------------------------------------------rJMSF041B10 107 ------------------------------>JMSF013E07 <----------------------------------------------------------------------rJMSF013E07 125 ---------------------------------------------------------------->JMSF049G14 <------------------------------------------------------------------------rJMSF049G14 209 ------------------->JMSF007A10 <------------------------------------------------------------------------rJMSF007A10
The following clones don't have the opposite end in this pair.
<-----------------------------------------------------------------rJMSF022B01*