| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF028K15 | Sequence | 540 | 005447 (8) | ref|XP_009622651.1| | 1e-14 | PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Nicotiana tomentosiformis] | 619 | 005447 (8) | ref|XP_002521533.1| | 7e-64 | ring finger protein, putative [Ricinus communis] gb|EEF40804.1| ring finger prot |
| JMSF020N03 | Sequence | 660 | 005447 (8) | ref|XP_006365590.1| | 3e-37 | PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Solanum tuberosum] | 755 | 005447 (8) | ref|XP_004231468.1| | 8e-85 | PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Solanum lycopersicum] |
| JMSF025L23 | Sequence | 642 | 005447 (8) | ref|XP_006365590.1| | 7e-34 | PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Solanum tuberosum] | 822 | 005447 (8) | ref|XP_004231468.1| | 5e-86 | PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Solanum lycopersicum] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig005447============================================1333 1 ---------------------------------------->JMFF028K15 <----------------------------------------------rJMFF028K15 151 ------------------------------------------------>JMSF020N03 <-------------------------------------------------------rJMSF020N03 152 ----------------------------------------------->JMSF025L23 <----------------------------------------------------------rJMSF025L23
The following clones don't have the opposite end in this pair.
<----------------------------------------------rJMFF044B11* <-----------------------------------------------------------rJMSF017N10*