List of clones in pair P016160.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019I12Sequence579000965 (39)ref|XP_009777894.1|8e-61PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana591000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFF036D22Sequence603000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN003E05Sequence548000965 (39)ref|XP_009777894.1|3e-61PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN004E03Sequence578000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN008B19Sequence640000965 (39)ref|XP_009777894.1|2e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN008L01Sequence611000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN011B10Sequence562000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN011C23Sequence551000965 (39)ref|XP_009777894.1|9e-61PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN011K11Sequence570000965 (39)ref|XP_009777894.1|3e-74PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN012I10Sequence625000965 (39)ref|XP_009777894.1|3e-59PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN015K11Sequence558000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN015O03Sequence558000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN016I05Sequence615000965 (39)ref|XP_009777894.1|2e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN028M23Sequence546000965 (39)ref|XP_009777894.1|9e-58PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN029B18Sequence560000965 (39)ref|XP_009777894.1|8e-61PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN032I16Sequence558000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN032L07Sequence591000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN032P05Sequence637000965 (39)ref|XP_009777894.1|3e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN035E19Sequence534000965 (39)ref|XP_009777894.1|1e-56PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN037G02Sequence518000965 (39)ref|XP_009777894.1|6e-61PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN040F14Sequence629000965 (39)ref|XP_009777894.1|3e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN040N13Sequence602000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN044G05Sequence558000965 (39)ref|XP_009777894.1|1e-52PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN045E23Sequence576000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFN045N15Sequence595000965 (39)ref|XP_009777894.1|2e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFS059B04Sequence558000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMFS098D10Sequence508000965 (39)ref|XP_009777894.1|2e-42PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMSF009O17Sequence252000965 (39)ref|XP_009777894.1|4e-37PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana539000965 (39)ref|XP_009777894.1|7e-61PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMSF012C04Sequence317000965 (39)ref|XP_009777894.1|4e-45PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana575000965 (39)ref|XP_009777894.1|9e-61PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMSF030H16Sequence585000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana500000965 (39)ref|XP_009777894.1|5e-57PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMSF036J05Sequence621000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana571000965 (39)ref|XP_009777894.1|7e-61PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana
JMSF047G02Sequence673000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana679000965 (39)ref|XP_009777894.1|1e-60PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Nicotiana

Contig 965 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000965============================================ 737         
  82 ------------------------------------------------------------------------------------------>JMSF047G02            
     <----------------------------------------------------------------------------------------rJMSF047G02  
 160        ------------------------------------------------------------------------------>JMFF019I12                 
            <-----------------------------------------------------------------------------rJMFF019I12  
 163        ------------------------------------------>JMSF012C04                                                     
            <-----------------------------------------------------------------------------rJMSF012C04  
 168        ---------------------------------------------------------------------------------->JMSF036J05             
            <----------------------------------------------------------------------------rJMSF036J05  
 199             --------------------------------->JMSF009O17                                                         
                 <------------------------------------------------------------------------rJMSF009O17  
 249             ----------------------------------------------------------------------------->JMSF030H16             
                 <-----------------------------------------------------------------rJMSF030H16

The following clones don't have the opposite end in this pair.

                ----------------------------------------------------------------------------->JMFN045E23-             
                    ------------------------------------------------------------------------------------>JMFN012I10-  
                   --------------------------------------------------------------------------->JMFN015K11-            
                           --------------------------------------------------------------------------->JMFN044G05-    
                --------------------------------------------------------------------->JMFN037G02-                     
                   --------------------------------------------------------------------------->JMFN032I16-            
                 ---------------------------------------------------------------------------->JMFN011K11-             
                  -------------------------------------------------------------------------->JMFN011C23-              
                 <-----------------------------------------------------------------------------JMFN008L01-            
                      ----------------------------------------------------------------------->JMFN035E19-             
                                 -------------------------------------------------------------------->JMFS098D10-     
                 ------------------------------------------------------>JMSF001F23*                                   
               ------------------------------------------------------------------------------------>JMFN040F14-       
              ------------------------------------------------------------------------------->JMFN032L07-             
                ------------------------------------------------------------------------------------->JMFN032P05-     
                  <----------------------------------------------------------------------------JMFN040N13-            
            --------------------------------------------------------------------------------->JMFF036D22-             
                   --------------------------------------------------------------------------->JMFN011B10-            
                    ------------------------------------------------------------------------->JMFN003E05-             
                -------------------------------------------------------------------------------->JMFN045N15-          
              -------------------------------------------------------------------------------------->JMFN008B19-      
                   --------------------------------------------------------------------------->JMFN015O03-            
                   --------------------------------------------------------------------------->JMFN029B18-            
                   --------------------------------------------------------------------------->JMFS059B04-            
                   ---------------------------------------------------------------------------------->JMFN016I05-     
                      ------------------------------------------------------------------------>JMFN028M23-            
                ----------------------------------------------------------------------------->JMFN004E03-