List of clones in pair P016137.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001A23Sequence530007941 (70)ref|XP_009617160.1|1e-99PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana tomentosifo709007941 (70)gb|AAR83875.1|4e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFF006P24Sequence614007941 (70)gb|AAR83875.1|9e-106mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto715007941 (70)gb|AAR83875.1|3e-105mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFF007N09Sequence627007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto759007941 (70)gb|AAR83875.1|7e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFF010D19Sequence390007941 (70)ref|XP_006650623.1|2e-66PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha]575007941 (70)ref|XP_006650623.1|3e-73PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha]
JMFF010I06Sequence544007941 (70)gb|AFP44116.1|5e-102eukaryotic translation initiation factor [Lycoris longituba]734007941 (70)gb|AAR83875.1|1e-102mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFF013A06Sequence485007941 (70)ref|XP_006650623.1|5e-64PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha]
JMFF018A03Sequence607007941 (70)gb|AAR83875.1|9e-106mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto740007941 (70)gb|AAR83875.1|5e-105mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFF021N16Sequence520007941 (70)ref|XP_009617160.1|5e-98PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana tomentosifo702007941 (70)gb|AAR83875.1|4e-103mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFF023N13Sequence463007941 (70)ref|XP_009780915.1|2e-83PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana sylvestris]715007941 (70)gb|AAR83875.1|4e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFF024B21Sequence524007941 (70)ref|XP_009617160.1|3e-98PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana tomentosifo642007941 (70)ref|XP_006650623.1|9e-88PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha]
JMFF030G12Sequence582007941 (70)gb|AAR83875.1|1e-103mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto677007941 (70)ref|XP_006650623.1|4e-95PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha]
JMFF031J20Sequence530007941 (70)ref|XP_009617160.1|1e-98PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana tomentosifo705007941 (70)gb|AAR83875.1|4e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFF033M03Sequence610007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto762007941 (70)gb|AAR83875.1|8e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFF044L22Sequence640007941 (70)gb|AAR83875.1|2e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto656007941 (70)ref|XP_006650623.1|1e-83PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha]
JMFF048F24Sequence392007941 (70)ref|NP_001275165.1|2e-72eukaryotic translation initiation factor 5A-3 [Solanum tuberosum] gb|AFW90607.1|325007941 (70)gb|AAR83875.1|2e-04mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN003H02Sequence623007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN003H08Sequence621007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN004L15Sequence575007941 (70)ref|XP_006650623.1|2e-102PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha]
JMFN006H09Sequence642007941 (70)gb|AAR83875.1|2e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN012A12Sequence472007941 (70)ref|XP_009617160.1|5e-94PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana tomentosifo
JMFN012P13Sequence616007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN013C24Sequence627007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN013D02Sequence660007941 (70)gb|AAR83875.1|2e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN013L11Sequence642007941 (70)gb|AAR83875.1|2e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN015F20Sequence581007941 (70)gb|AAR83875.1|3e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN017J23Sequence622007941 (70)gb|AAR83875.1|8e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN017P12Sequence605007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN018H10Sequence564007941 (70)gb|AAR83875.1|6e-105mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN019G04Sequence502007941 (70)ref|XP_006650623.1|7e-46PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha]
JMFN019L15Sequence636007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN020P01Sequence643007941 (70)gb|AAR83875.1|2e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN025F07Sequence633007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN028P02Sequence640007941 (70)gb|AAR83875.1|2e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN029M06Sequence632007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN032D13Sequence624007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN032E01Sequence631007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN032G19Sequence616007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN033J06Sequence175007941 (70)ref|XP_006650623.1|9e-28PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha]
JMFN033O07Sequence472007941 (70)ref|XP_009617160.1|5e-94PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana tomentosifo
JMFN034L09Sequence633007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN036H03Sequence583007941 (70)gb|AFP44116.1|1e-91eukaryotic translation initiation factor [Lycoris longituba]
JMFN036L01Sequence608007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN036L09Sequence606007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN036O06Sequence507007941 (70)ref|XP_009617160.1|3e-96PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana tomentosifo
JMFN038G16Sequence634007941 (70)gb|AAR83875.1|2e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN039B14Sequence631007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN042B15Sequence628007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMFN043O21Sequence616007941 (70)gb|AAR83875.1|1e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMSF012L03Sequence474007941 (70)ref|XP_009780915.1|2e-84PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana sylvestris]738007941 (70)gb|AAR83875.1|6e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMSF031K15Sequence664007941 (70)gb|AAR83875.1|2e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto745007941 (70)gb|AAR83875.1|6e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto
JMSF037D14Sequence682007941 (70)gb|AAR83875.1|3e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto743007941 (70)gb|AAR83875.1|6e-104mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto

Contig 7941 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig007941============================================ 829         
  18 ------------------------------------------------------------------------------->JMSF031K15                       
             <-----------------------------------------------------------------------------------------rJMSF031K15  
  38    --------------------------------------------------------------------------------->JMSF037D14                  
             <-----------------------------------------------------------------------------------------rJMSF037D14  
  39      -------------------------------------------------------------->JMFF024B21                                   
                           <-----------------------------------------------------------------------------rJMFF024B21  
  41      ------------------------------------------------------------------------->JMFF033M03                        
              <------------------------------------------------------------------------------------------rJMFF033M03  
  45      -------------------------------------------------------------->JMFF021N16                                   
                    <------------------------------------------------------------------------------------rJMFF021N16  
  45      ----------------------------------------------------------------->JMFF010I06                                
                <----------------------------------------------------------------------------------------rJMFF010I06  
  49       --------------------------------------------------------------------->JMFF030G12                           
                       <---------------------------------------------------------------------------------rJMFF030G12  
  53     -------------------------------------------------------->JMSF012L03                                          
              <----------------------------------------------------------------------------------------rJMSF012L03  
  54      ---------------------------------------------------------------------------->JMFF044L22                     
                             <-------------------------------------------------------------------------rJMFF044L22  
  63      --------------------------------------------------------------------------->JMFF007N09                      
           <------------------------------------------------------------------------------------------rJMFF007N09  
  68      -------------------------------------------------------------->JMFF031J20                                   
                <------------------------------------------------------------------------------------rJMFF031J20  
  69      ------------------------------------------------------->JMFF023N13                                          
               <-------------------------------------------------------------------------------------rJMFF023N13  
  73         ---------------------------------------------->JMFF048F24                                                
                                                                     <----------------------------------rJMFF048F24  
  83        ------------------------------------------------------------------------>JMFF018A03                       
              <---------------------------------------------------------------------------------------rJMFF018A03  
  83        ------------------------------------------------------------------------->JMFF006P24                      
                <-------------------------------------------------------------------------------------rJMFF006P24  
  95      --------------------------------------------------------------->JMFF001A23                                  
              <-----------------------------------------------------------------------------------rJMFF001A23  
 343                                   ---------------------------------------------->JMFF010D19                      
                            <--------------------------------------------------------------------rJMFF010D19  

The following clones don't have the opposite end in this pair.

           ------------------------------------------------------------>JMFN036O06-                                   
             -------------------------------------------------------------------------->JMFN032D13-                   
              -------------------------------------------------------------------------->JMFN029M06-                  
          ------------------------------------------------------------------------------->JMSF022B01*                 
             ----------------------------------------------------------------------------->JMFN020P01-                
              --------------------------------------------------------------------->JMFN015F20-                       
             --------------------------------------------------------------------------->JMFN042B15-                  
            ------------------------------------------------------------------------------>JMFN013D02-                
                                       <----------------------------------------------------------rJMFF013A06-        
                                                     -------------------->JMFN033J06-                                 
            ------------------------------------------------------------------->JMFN018H10-                           
            -------------------------------------------------------------------------->JMFN017J23-                    
                 ---------------------------------------------------------------------------->JMFN019L15-             
               --------------------------------------------------------------------------->JMFN032E01-                
            ------------------------------------------------------------------------->JMFN043O21-                     
           ------------------------------------------------------------------------>JMFN017P12-                       
              -------------------------------------------------------->JMFN012A12-                                    
          --------------------------------------------------------------------------->JMFN039B14-                     
              ------------------------------------------------------------------------>JMFN036L09-                    
           --------------------------------------------------------------------->JMFN036H03-                          
          ---------------------------------------------------------------------------->JMFN013L11-                    
            ------------------------------------------------------------------------->JMFN032G19-                     
            -------------------------------------------------------------------------->JMFN003H02-                    
            --------------------------------------------------------------------------->JMFN025F07-                   
             --------------------------------------------------------------------------->JMFN013C24-                  
                     -------------------------------------------------------------------->JMFN004L15-                 
            ------------------------------------------------------------------------>JMFN036L01-                      
         ---------------------------------------------------------------------------->JMFN006H09-                     
             --------------------------------------------------------------------------->JMFN034L09-                  
          -------------------------------------------------------------------------->JMFN003H08-                      
         --------------------------->JMSF019N14#                                                                      
            ------------------------------------------------------------------------->JMFN012P13-                     
            ---------------------------------------------------------------------------->JMFN038G16-                  
                  ---------------------------------------------------------------------------->JMFN028P02-            
              -------------------------------------------------------->JMFN033O07-                                    
                                               -------------------------------------------------------->JMFN019G04-