clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001A23 | Sequence | 530 | 007941 (70) | ref|XP_009617160.1| | 1e-99 | PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana tomentosifo | 709 | 007941 (70) | gb|AAR83875.1| | 4e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto |
JMFF006P24 | Sequence | 614 | 007941 (70) | gb|AAR83875.1| | 9e-106 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | 715 | 007941 (70) | gb|AAR83875.1| | 3e-105 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto |
JMFF007N09 | Sequence | 627 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | 759 | 007941 (70) | gb|AAR83875.1| | 7e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto |
JMFF010D19 | Sequence | 390 | 007941 (70) | ref|XP_006650623.1| | 2e-66 | PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha] | 575 | 007941 (70) | ref|XP_006650623.1| | 3e-73 | PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha] |
JMFF010I06 | Sequence | 544 | 007941 (70) | gb|AFP44116.1| | 5e-102 | eukaryotic translation initiation factor [Lycoris longituba] | 734 | 007941 (70) | gb|AAR83875.1| | 1e-102 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto |
JMFF013A06 | Sequence | 485 | 007941 (70) | ref|XP_006650623.1| | 5e-64 | PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha] | |||||
JMFF018A03 | Sequence | 607 | 007941 (70) | gb|AAR83875.1| | 9e-106 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | 740 | 007941 (70) | gb|AAR83875.1| | 5e-105 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto |
JMFF021N16 | Sequence | 520 | 007941 (70) | ref|XP_009617160.1| | 5e-98 | PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana tomentosifo | 702 | 007941 (70) | gb|AAR83875.1| | 4e-103 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto |
JMFF023N13 | Sequence | 463 | 007941 (70) | ref|XP_009780915.1| | 2e-83 | PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana sylvestris] | 715 | 007941 (70) | gb|AAR83875.1| | 4e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto |
JMFF024B21 | Sequence | 524 | 007941 (70) | ref|XP_009617160.1| | 3e-98 | PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana tomentosifo | 642 | 007941 (70) | ref|XP_006650623.1| | 9e-88 | PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha] |
JMFF030G12 | Sequence | 582 | 007941 (70) | gb|AAR83875.1| | 1e-103 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | 677 | 007941 (70) | ref|XP_006650623.1| | 4e-95 | PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha] |
JMFF031J20 | Sequence | 530 | 007941 (70) | ref|XP_009617160.1| | 1e-98 | PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana tomentosifo | 705 | 007941 (70) | gb|AAR83875.1| | 4e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto |
JMFF033M03 | Sequence | 610 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | 762 | 007941 (70) | gb|AAR83875.1| | 8e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto |
JMFF044L22 | Sequence | 640 | 007941 (70) | gb|AAR83875.1| | 2e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | 656 | 007941 (70) | ref|XP_006650623.1| | 1e-83 | PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha] |
JMFF048F24 | Sequence | 392 | 007941 (70) | ref|NP_001275165.1| | 2e-72 | eukaryotic translation initiation factor 5A-3 [Solanum tuberosum] gb|AFW90607.1| | 325 | 007941 (70) | gb|AAR83875.1| | 2e-04 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto |
JMFN003H02 | Sequence | 623 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN003H08 | Sequence | 621 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN004L15 | Sequence | 575 | 007941 (70) | ref|XP_006650623.1| | 2e-102 | PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha] | |||||
JMFN006H09 | Sequence | 642 | 007941 (70) | gb|AAR83875.1| | 2e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN012A12 | Sequence | 472 | 007941 (70) | ref|XP_009617160.1| | 5e-94 | PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana tomentosifo | |||||
JMFN012P13 | Sequence | 616 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN013C24 | Sequence | 627 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN013D02 | Sequence | 660 | 007941 (70) | gb|AAR83875.1| | 2e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN013L11 | Sequence | 642 | 007941 (70) | gb|AAR83875.1| | 2e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN015F20 | Sequence | 581 | 007941 (70) | gb|AAR83875.1| | 3e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN017J23 | Sequence | 622 | 007941 (70) | gb|AAR83875.1| | 8e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN017P12 | Sequence | 605 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN018H10 | Sequence | 564 | 007941 (70) | gb|AAR83875.1| | 6e-105 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN019G04 | Sequence | 502 | 007941 (70) | ref|XP_006650623.1| | 7e-46 | PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha] | |||||
JMFN019L15 | Sequence | 636 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN020P01 | Sequence | 643 | 007941 (70) | gb|AAR83875.1| | 2e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN025F07 | Sequence | 633 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN028P02 | Sequence | 640 | 007941 (70) | gb|AAR83875.1| | 2e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN029M06 | Sequence | 632 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN032D13 | Sequence | 624 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN032E01 | Sequence | 631 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN032G19 | Sequence | 616 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN033J06 | Sequence | 175 | 007941 (70) | ref|XP_006650623.1| | 9e-28 | PREDICTED: eukaryotic translation initiation factor 5A-like [Oryza brachyantha] | |||||
JMFN033O07 | Sequence | 472 | 007941 (70) | ref|XP_009617160.1| | 5e-94 | PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana tomentosifo | |||||
JMFN034L09 | Sequence | 633 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN036H03 | Sequence | 583 | 007941 (70) | gb|AFP44116.1| | 1e-91 | eukaryotic translation initiation factor [Lycoris longituba] | |||||
JMFN036L01 | Sequence | 608 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN036L09 | Sequence | 606 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN036O06 | Sequence | 507 | 007941 (70) | ref|XP_009617160.1| | 3e-96 | PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana tomentosifo | |||||
JMFN038G16 | Sequence | 634 | 007941 (70) | gb|AAR83875.1| | 2e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN039B14 | Sequence | 631 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN042B15 | Sequence | 628 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMFN043O21 | Sequence | 616 | 007941 (70) | gb|AAR83875.1| | 1e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | |||||
JMSF012L03 | Sequence | 474 | 007941 (70) | ref|XP_009780915.1| | 2e-84 | PREDICTED: eukaryotic translation initiation factor 5A-3 [Nicotiana sylvestris] | 738 | 007941 (70) | gb|AAR83875.1| | 6e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto |
JMSF031K15 | Sequence | 664 | 007941 (70) | gb|AAR83875.1| | 2e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | 745 | 007941 (70) | gb|AAR83875.1| | 6e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto |
JMSF037D14 | Sequence | 682 | 007941 (70) | gb|AAR83875.1| | 3e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto | 743 | 007941 (70) | gb|AAR83875.1| | 6e-104 | mary storys protein [Capsicum annuum] gb|AAS48586.1| eukaryotic initiation facto |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig007941============================================ 829 18 ------------------------------------------------------------------------------->JMSF031K15 <-----------------------------------------------------------------------------------------rJMSF031K15 38 --------------------------------------------------------------------------------->JMSF037D14 <-----------------------------------------------------------------------------------------rJMSF037D14 39 -------------------------------------------------------------->JMFF024B21 <-----------------------------------------------------------------------------rJMFF024B21 41 ------------------------------------------------------------------------->JMFF033M03 <------------------------------------------------------------------------------------------rJMFF033M03 45 -------------------------------------------------------------->JMFF021N16 <------------------------------------------------------------------------------------rJMFF021N16 45 ----------------------------------------------------------------->JMFF010I06 <----------------------------------------------------------------------------------------rJMFF010I06 49 --------------------------------------------------------------------->JMFF030G12 <---------------------------------------------------------------------------------rJMFF030G12 53 -------------------------------------------------------->JMSF012L03 <----------------------------------------------------------------------------------------rJMSF012L03 54 ---------------------------------------------------------------------------->JMFF044L22 <-------------------------------------------------------------------------rJMFF044L22 63 --------------------------------------------------------------------------->JMFF007N09 <------------------------------------------------------------------------------------------rJMFF007N09 68 -------------------------------------------------------------->JMFF031J20 <------------------------------------------------------------------------------------rJMFF031J20 69 ------------------------------------------------------->JMFF023N13 <-------------------------------------------------------------------------------------rJMFF023N13 73 ---------------------------------------------->JMFF048F24 <----------------------------------rJMFF048F24 83 ------------------------------------------------------------------------>JMFF018A03 <---------------------------------------------------------------------------------------rJMFF018A03 83 ------------------------------------------------------------------------->JMFF006P24 <-------------------------------------------------------------------------------------rJMFF006P24 95 --------------------------------------------------------------->JMFF001A23 <-----------------------------------------------------------------------------------rJMFF001A23 343 ---------------------------------------------->JMFF010D19 <--------------------------------------------------------------------rJMFF010D19
The following clones don't have the opposite end in this pair.
------------------------------------------------------------>JMFN036O06- -------------------------------------------------------------------------->JMFN032D13- -------------------------------------------------------------------------->JMFN029M06- ------------------------------------------------------------------------------->JMSF022B01* ----------------------------------------------------------------------------->JMFN020P01- --------------------------------------------------------------------->JMFN015F20- --------------------------------------------------------------------------->JMFN042B15- ------------------------------------------------------------------------------>JMFN013D02- <----------------------------------------------------------rJMFF013A06- -------------------->JMFN033J06- ------------------------------------------------------------------->JMFN018H10- -------------------------------------------------------------------------->JMFN017J23- ---------------------------------------------------------------------------->JMFN019L15- --------------------------------------------------------------------------->JMFN032E01- ------------------------------------------------------------------------->JMFN043O21- ------------------------------------------------------------------------>JMFN017P12- -------------------------------------------------------->JMFN012A12- --------------------------------------------------------------------------->JMFN039B14- ------------------------------------------------------------------------>JMFN036L09- --------------------------------------------------------------------->JMFN036H03- ---------------------------------------------------------------------------->JMFN013L11- ------------------------------------------------------------------------->JMFN032G19- -------------------------------------------------------------------------->JMFN003H02- --------------------------------------------------------------------------->JMFN025F07- --------------------------------------------------------------------------->JMFN013C24- -------------------------------------------------------------------->JMFN004L15- ------------------------------------------------------------------------>JMFN036L01- ---------------------------------------------------------------------------->JMFN006H09- --------------------------------------------------------------------------->JMFN034L09- -------------------------------------------------------------------------->JMFN003H08- --------------------------->JMSF019N14# ------------------------------------------------------------------------->JMFN012P13- ---------------------------------------------------------------------------->JMFN038G16- ---------------------------------------------------------------------------->JMFN028P02- -------------------------------------------------------->JMFN033O07- -------------------------------------------------------->JMFN019G04-