List of clones in pair P016048.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP006F12Sequence608011451 (24)ref|XP_004241806.1|8e-88PREDICTED: 60S ribosomal protein L18a [Solanum lycopersicum]
JMFF025H17Sequence176011451 (24)149011451 (24)
JMFF035G11Sequence519011451 (24)ref|XP_004241806.1|2e-100PREDICTED: 60S ribosomal protein L18a [Solanum lycopersicum]680011451 (24)ref|XP_004241806.1|4e-101PREDICTED: 60S ribosomal protein L18a [Solanum lycopersicum]
JMFF038I16Sequence428011451 (24)emb|CDP06299.1|7e-76unnamed protein product [Coffea canephora]657011451 (24)ref|XP_009799848.1|1e-84PREDICTED: 60S ribosomal protein L18a [Nicotiana sylvestris]
JMFF045G11Sequence581011451 (24)ref|XP_004241806.1|1e-114PREDICTED: 60S ribosomal protein L18a [Solanum lycopersicum]553011451 (24)ref|XP_009799848.1|2e-62PREDICTED: 60S ribosomal protein L18a [Nicotiana sylvestris]
JMFN002D02Sequence455011451 (24)ref|XP_004241806.1|2e-91PREDICTED: 60S ribosomal protein L18a [Solanum lycopersicum]
JMFN007E04Sequence612011451 (24)ref|XP_009799848.1|4e-122PREDICTED: 60S ribosomal protein L18a [Nicotiana sylvestris]
JMFN015B16Sequence610011451 (24)gb|ADE42972.1|7e-123putative 60S ribosomal protein L18a [Gardenia jasminoides]
JMFN018I08Sequence606011451 (24)gb|ADE42972.1|6e-123putative 60S ribosomal protein L18a [Gardenia jasminoides]
JMFN033P04Sequence609011451 (24)gb|ADE42972.1|5e-122putative 60S ribosomal protein L18a [Gardenia jasminoides]
JMFN042P23Sequence173011451 (24)gb|KGN54936.1|4e-21hypothetical protein Csa_4G608120 [Cucumis sativus]
JMSF004E01Sequence428011451 (24)ref|XP_004147412.1|3e-76PREDICTED: 60S ribosomal protein L18a-like [Cucumis sativus] ref|XP_004164939.1|
JMSF007J14Sequence432011451 (24)ref|XP_004147412.1|7e-77PREDICTED: 60S ribosomal protein L18a-like [Cucumis sativus] ref|XP_004164939.1|661011451 (24)gb|ADE42972.1|3e-121putative 60S ribosomal protein L18a [Gardenia jasminoides]
JMSF026J22Sequence662011451 (24)gb|ADE42972.1|2e-90putative 60S ribosomal protein L18a [Gardenia jasminoides]
JMSF037K05Sequence659011451 (24)gb|ADE42972.1|9e-123putative 60S ribosomal protein L18a [Gardenia jasminoides]692011451 (24)gb|ADE42972.1|2e-122putative 60S ribosomal protein L18a [Gardenia jasminoides]
JMSF045P18Sequence705011451 (24)gb|ADE42972.1|9e-122putative 60S ribosomal protein L18a [Gardenia jasminoides]623011451 (24)ref|XP_009799848.1|2e-119PREDICTED: 60S ribosomal protein L18a [Nicotiana sylvestris]

Contig 11451 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig011451============================================1004         
 135              --------------------------------------------------------->JMFF045G11                                
                                                  <------------------------------------------------------rJMFF045G11  
 172              ------------------------------------------>JMFF038I16                                               
                                    <----------------------------------------------------------------rJMFF038I16  
 173               -------------------------------------------------->JMFF035G11                                      
                                  <------------------------------------------------------------------rJMFF035G11  
 287               --------------------------------------------------------------------->JMSF045P18                   
                            <-------------------------------------------------------------rJMSF045P18  
 330               ---------------------------------------------------------------->JMSF037K05                        
                   <------------------------------------------------------------------rJMSF037K05  
 346               ------------------------------------------>JMSF007J14                                              
                   <-----------------------------------------------------------------rJMSF007J14  
 855                                                                                 ---------------->JMFF025H17      
                                                                                     <--------------rJMFF025H17

The following clones don't have the opposite end in this pair.

                  ------------------------------------------>JMSF004E01-                                              
                     ------------------------------------------------------------>JMFN007E04-                         
                       ------------------------------------------------------------>JMFN033P04-                       
                      ---------------->JMFN042P23-                                                                    
                  ----------------------------------------------------------------->JMSF026J22-                       
                     ------------------------------------------------------------>JMFN015B16-                         
                  ------------------------------------------------------------------->JMSF027C12*                     
                     -------------------------------------------->JMFN002D02-                                         
     ------------------------------------------------------------>JMCP006F12-                                         
                    ----------------------------------------------------------->JMFN018I08-