clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005J05 | Sequence | 507 | 010149 (15) | gb|KDP46286.1| | 2e-64 | hypothetical protein JCGZ_10126 [Jatropha curcas] | 758 | 010149 (15) | gb|KJB11669.1| | 7e-77 | hypothetical protein B456_001G270800 [Gossypium raimondii] |
JMFF005K15 | Sequence | 495 | 010149 (15) | gb|KDP46286.1| | 2e-62 | hypothetical protein JCGZ_10126 [Jatropha curcas] | 694 | 010149 (15) | ref|XP_006338694.1| | 2e-112 | PREDICTED: sulfite oxidase-like isoform X1 [Solanum tuberosum] ref|XP_006338695. |
JMSF003L03 | Sequence | 345 | 010149 (15) | gb|KDP46286.1| | 6e-58 | hypothetical protein JCGZ_10126 [Jatropha curcas] | 752 | 010149 (15) | ref|XP_006338694.1| | 1e-111 | PREDICTED: sulfite oxidase-like isoform X1 [Solanum tuberosum] ref|XP_006338695. |
JMSF005D08 | Sequence | 298 | 010149 (15) | gb|KDP46286.1| | 5e-43 | hypothetical protein JCGZ_10126 [Jatropha curcas] | |||||
JMSF005O24 | Sequence | 313 | 010149 (15) | gb|KDP46286.1| | 1e-46 | hypothetical protein JCGZ_10126 [Jatropha curcas] | 408 | 010149 (15) | ref|NP_001234681.1| | 2e-42 | sulfite oxidase [Solanum lycopersicum] gb|ABI53846.1| sulfite oxidase [Solanum l |
JMSF017D06 | Sequence | 526 | 010149 (15) | ref|XP_006338694.1| | 7e-110 | PREDICTED: sulfite oxidase-like isoform X1 [Solanum tuberosum] ref|XP_006338695. | 791 | 010149 (15) | ref|XP_006338694.1| | 5e-135 | PREDICTED: sulfite oxidase-like isoform X1 [Solanum tuberosum] ref|XP_006338695. |
JMSF020N05 | Sequence | 688 | 010149 (15) | gb|KDP46286.1| | 2e-134 | hypothetical protein JCGZ_10126 [Jatropha curcas] | 782 | 010149 (15) | ref|XP_006338694.1| | 2e-134 | PREDICTED: sulfite oxidase-like isoform X1 [Solanum tuberosum] ref|XP_006338695. |
JMSF047M06 | Sequence | 668 | 010149 (15) | gb|KDP46286.1| | 1e-129 | hypothetical protein JCGZ_10126 [Jatropha curcas] | 802 | 010149 (15) | ref|XP_006338694.1| | 6e-138 | PREDICTED: sulfite oxidase-like isoform X1 [Solanum tuberosum] ref|XP_006338695. |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010149============================================1551 24 -------------------------------->JMFF005J05 <-----------------------------------------------rJMFF005J05 65 ------------------------------->JMFF005K15 <--------------------------------------------rJMFF005K15 131 --------------------->JMSF003L03 <------------------------------------------------rJMSF003L03 178 ------------------------------------------>JMSF047M06 <---------------------------------------------------rJMSF047M06 179 ------------------------------------------->JMSF020N05 <-------------------------------------------------rJMSF020N05 193 ------------------->JMSF005O24 <-------------------------rJMSF005O24 723 --------------------------------->JMSF017D06 <--------------------------------------------------rJMSF017D06
The following clones don't have the opposite end in this pair.
------------------>JMSF005D08-